Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1281 ATGCAACACTATCACCCTCAATCCCATATCGCCGCCACCCCCGATGGGGCCGGCAGCGTCATTTCTGATGCTAAACGCGGCAAAAAGCGTGGCAGTTATAACTGTGGACGTTGCGGGGTTCCTAAGAAGGGCCATGTTTGCCATCTAAGAACTCCCACACCTGCTCCTTCTACTACTCCTACTGATGCATCGGTTTCGAGTTTTTCTGCCATTTCCGGACCTTCATCTGTCAGCATAGTTCGTCAGCCGCCTCCCCGGCAGCCATACTCTCGCCTCCGTCGCGCGTTATCATTCGATGACGTCGATGACCGTACCAGTGGATTTGATCCGCCGGAGTTTTCTGTAGGAGAGGATCGAGATATATTTATTGACCCTGAGCCGGATCTAGATTCGTCCGGGTTGCCGGCAAACCTTTTGTGGGAAGTGCTGAAGAGGCTGCCTCCGACGGGATTGTTGTCAGCGGCTAGGGTAAGCAAGGGATGGAGGGATATGACGAGGAGTCTGTGGAGGGCAGCGGAAGAGCTTAAACTCAGGGTTCCAGCAGGCGTTCAGCTTGGATTTGTTGCATCGATGCTGCAGAAGTGTCCGGGGGTCGTGAAACTCTCTCTTAAAATGGAAAGCGATTTGGATTCAACCATGCTGGCCTGCATTGCATTCTCATGCCCCAATCTGGAGTCTATGGAGATATCAACATCTAATTCTGCAATCAATCGGATCAATGGGGATGAATTAAGTCGATTTGTTGCTGATAAACGAAGCTTGAAATGCCTCAAGATGGAAGGTTGCCATAATCTGGGGGGTTTTGTTCTGTGTTCTTCTAGTCTTTCAACACTTTGGCTATCGGATCTCCATTCTCTTTCTAAGATGGTATTTAACTGTCCCCAGCTGAGAGAGATATCATTGGAATTTTCTCGACAAGAGAATGAAGCTACTGATATCACTGCTGCGGTTGCAAATTTGGGACGAACTTGCCCGAGGTTGCAAAACATACATATAGCTTCAATGCGGCTTTCTAATGCTGCTGTGCTTGCTCTAATGGCTGCTCCGTTGAGAGGGCTGCGAATGCTTTCTCTAGTTCTTGGATTTGAAGTTACTGATGCATCTGTTGCCGCAATTGCTTCCAGCTATCCAAATCTAGAATTGCTTGATCTCAGTGGATCTAGCATCAGTGACGGTGGAATTGGGATAATCTGTAATGCATTCCCTGAAACATTGTCAAGATTTCTCCTCGCTCTTTGCCCCAACGTGACCTCGAGTGGCATTCAATTTGCTTCAGCTCAATTGCCGCTTCTTGAACTTATGGACTGTGGAATGACCATATGGGATCCTAATTCTGACAATCAAACTGCTGACGAAAGCAACTGCAAATCCACATCCAATTCTAATCTTCACCTTGTGAATCAGAAGTTAATTATCAAACATAACCGATTGAAGAAACTAAGTTTATGGGGCTGTTCGGGCTTAGATGTGAAGAGATTGTTGCTTCAGTGCCCCAGTTTAGAAAACGTACATGCATTAGGTTGTCAGGACATGCTAATTGGGGCTATTCAAAGTCAGGTCTGCAATGCTTTTACCGCTATGGAAAACCTATCACCTTGTAAACGTCTACCTGATGGCTCCAAAAGGGTCAGGGTTCCGCATTTTCTCAGTAGTGAGTTGCCTCATGATGGTAAAAGGCCGAGGAGGGCTGAGAATAGGCTCTGCAATGTCCATGTCGACTGA 1722 0.4721 MQHYHPQSHIAATPDGAGSVISDAKRGKKRGSYNCGRCGVPKKGHVCHLRTPTPAPSTTPTDASVSSFSAISGPSSVSIVRQPPPRQPYSRLRRALSFDDVDDRTSGFDPPEFSVGEDRDIFIDPEPDLDSSGLPANLLWEVLKRLPPTGLLSAARVSKGWRDMTRSLWRAAEELKLRVPAGVQLGFVASMLQKCPGVVKLSLKMESDLDSTMLACIAFSCPNLESMEISTSNSAINRINGDELSRFVADKRSLKCLKMEGCHNLGGFVLCSSSLSTLWLSDLHSLSKMVFNCPQLREISLEFSRQENEATDITAAVANLGRTCPRLQNIHIASMRLSNAAVLALMAAPLRGLRMLSLVLGFEVTDASVAAIASSYPNLELLDLSGSSISDGGIGIICNAFPETLSRFLLALCPNVTSSGIQFASAQLPLLELMDCGMTIWDPNSDNQTADESNCKSTSNSNLHLVNQKLIIKHNRLKKLSLWGCSGLDVKRLLLQCPSLENVHALGCQDMLIGAIQSQVCNAFTAMENLSPCKRLPDGSKRVRVPHFLSSELPHDGKRPRRAENRLCNVHVD 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1281 573 Gene3D Ribonuclease Inhibitor 173 465 IPR032675 -
Lele08g1281 573 Gene3D - 126 171 - -
Lele08g1281 573 MobiDBLite consensus disorder prediction 1 33 - -
Lele08g1281 573 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 156 509 - -
Lele08g1281 573 ProSiteProfiles F-box domain profile. 128 172 IPR001810 GO:0005515
Lele08g1281 573 Pfam F-box domain 132 167 IPR001810 GO:0005515
Lele08g1281 573 FunFam Uncharacterized protein 127 315 - -
Lele08g1281 573 SUPERFAMILY RNI-like 189 419 - -
Lele08g1281 573 SUPERFAMILY F-box domain 131 172 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1281 Lele-ChrLele08 8149149 8153356 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1281 08 8149149 8153356 Lele13g1954 13 27064711 27066898 CCT
Lele08g1281 08 8149149 8153356 Lele14g1883 14 25391982 25394171 CCT
Lele08g1281 08 8149149 8153356 Lele15g0456 15 2649019 2651217 CCT
Lele08g1281 08 8149149 8153356 Lele16g0478 16 2618238 2620395 CCT
Lele05g1423 05 9039267 9044188 Lele08g1281 08 8149149 8153356 hybridization
Lele06g1285 06 8192004 8196193 Lele08g1281 08 8149149 8153356 hybridization