Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1487 ATGCAACACTATCACCCTCAATCCTATATCGCCGCCACCCCTGATGGCGCCGGCAGCGTCATTTCTGATGGTAAACGCGGCAAAAAGCGAGGCAGTTATAACTGTGGACGCTGCGGTCTTCCTAAGAAGGGCCATGTTTGCCATCTCAGAACTCCCACATCTGCTCCTGCTAATACTCCTACTGATGTATCGGCATCGAGTTTTTCTGCGATTTCCGGCCCTTCATCTGTCAGCGTAGTTCGTCAGCCGCCGCCCCGGCAGCCTTACTCTCGCCTCCGTCGTGCGTTATCATTCGATGACGTCGATGACCATACCAGCGGATTCGATCCTTTGGAGTTGTCTGACGAAGAGGGTCGGGATCTATTTATTGACCCAGAGCCGGATCTAGATTCGTCTGGGTTGCCGGCAAGCCTTTTGTGGGAAGTGCTGAAGAGGCTGCCGCCGACGGGATTGTTGTCAGCGGCTAGGGTATGCAAGGGATGGAGGGATATGACGAGGAGGCTGTGGAGGGCAGCGGAGGAGCTTAAACTCAGGGTTCCAGCAGGCGTCAAGCTTGGATTTGTTGCATTGATGCTGCAGAAGTGTCCGGGAGTTGTGAAGCTCTCTCTTAAAATGGAAAGCGATTTGGATTCAACCATGCTGGCCTGCATTGCATTCTCATGCCCTAATCTGGAGTCTATGGAGATATCGACATCTAATACTGCAATCAATCGGATCAATGGGGATGAATTAAACCGATTTGTTGCTGATAAACGAAACCTGAAATGCCTCAAGATGGAAGGTTGTCATAATCTGGGGGGTTTTGTTCTGTGTTCTTCTAGTCTTTCAACACTTTGGTTATCGGATCTCCATTCTCTTTCTAAGATGGTATTTAACTGTCCCCAGCTGAGAGAGATATCATTGGAATTTTCTCAACAAGAAAATGAAGCTACTGATATCACTGGTATGGTTGAAAATTTGGGACGAACCTGCCCCAGATTGCAAAATATACATATCTCTTCAATGCGGCTTTCTAATGCGGCTGTACTTGCTCTAACGGCTGCTCAGTTGAGAGGGCTGCGAATGCTTTCTTTAGTTCTTGGATTTGAAGTTACTGATGCATCTGTTGCCGCAATTGCTTCCAGCTATCCAAATCTAGAATTGCTTGATCTCAGTGGATCTAGCATCAGTGACAGTGGAATTGGGATAATCTGTAATGCATTCCCAGAAACTTTGTCAAGACTTCTCCTCGCTCTTTGCCCCAACGTGACCTCAAGTGGCATTCAATTTGCTTCAGCTCAATTGCCGCTTCTTGAACTTATGGACTGTGGCATGACCATATGTGATCCTAATTCTGAAAATCAAACTGCTGATGAAAACAACTGCAAATCAACATCCAATTCTAATCTTCACCTTGTGAATCAGAAGTTAATTATCAAACACAATCGATTGAAGAAACTAAGTTTATGGGGCTGTTCTGGCTTAGATGCTCTATATTTAAACTGTCCACAGCTCAATGATTTGAATCTAAACTCTTGTAAAAATTTGCATCCAGAGAGATTGTTGCTTCAGTGCCCCGGTTTAGAAAATGTACATGCATCAGGTTGTCAGGACATGCTAATTGGGGCTATTCAAAGTCAGGTCTGCAATGCCTTTACCGCTATGGAAAACCTATCACCTTGTAAACGTCTACCTGATGGCTCCAAAAGGGTCAGGGTTCCGCATTTTCTCAGTAGCGAGTTGCCTCGTGATGGGAAAAAGCGGAGGAGGGCTGAGAATAGGCTCTGCAATGTGCATGTCGACTGA 1785 0.4622 MQHYHPQSYIAATPDGAGSVISDGKRGKKRGSYNCGRCGLPKKGHVCHLRTPTSAPANTPTDVSASSFSAISGPSSVSVVRQPPPRQPYSRLRRALSFDDVDDHTSGFDPLELSDEEGRDLFIDPEPDLDSSGLPASLLWEVLKRLPPTGLLSAARVCKGWRDMTRRLWRAAEELKLRVPAGVKLGFVALMLQKCPGVVKLSLKMESDLDSTMLACIAFSCPNLESMEISTSNTAINRINGDELNRFVADKRNLKCLKMEGCHNLGGFVLCSSSLSTLWLSDLHSLSKMVFNCPQLREISLEFSQQENEATDITGMVENLGRTCPRLQNIHISSMRLSNAAVLALTAAQLRGLRMLSLVLGFEVTDASVAAIASSYPNLELLDLSGSSISDSGIGIICNAFPETLSRLLLALCPNVTSSGIQFASAQLPLLELMDCGMTICDPNSENQTADENNCKSTSNSNLHLVNQKLIIKHNRLKKLSLWGCSGLDALYLNCPQLNDLNLNSCKNLHPERLLLQCPGLENVHASGCQDMLIGAIQSQVCNAFTAMENLSPCKRLPDGSKRVRVPHFLSSELPRDGKKRRRAENRLCNVHVD 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1487 594 FunFam Uncharacterized protein 127 313 - -
Lele07g1487 594 ProSiteProfiles F-box domain profile. 128 172 IPR001810 GO:0005515
Lele07g1487 594 SMART LRR_CC_2 350 375 IPR006553 -
Lele07g1487 594 SMART LRR_CC_2 324 348 IPR006553 -
Lele07g1487 594 SMART LRR_CC_2 495 518 IPR006553 -
Lele07g1487 594 SMART LRR_CC_2 376 400 IPR006553 -
Lele07g1487 594 SUPERFAMILY RNI-like 190 419 - -
Lele07g1487 594 MobiDBLite consensus disorder prediction 1 32 - -
Lele07g1487 594 SUPERFAMILY F-box domain 132 172 IPR036047 GO:0005515
Lele07g1487 594 Gene3D Ribonuclease Inhibitor 451 572 IPR032675 -
Lele07g1487 594 Gene3D Ribonuclease Inhibitor 172 450 IPR032675 -
Lele07g1487 594 FunFam Uncharacterized protein 451 558 - -
Lele07g1487 594 Pfam F-box domain 132 167 IPR001810 GO:0005515
Lele07g1487 594 Gene3D - 126 171 - -
Lele07g1487 594 MobiDBLite consensus disorder prediction 53 83 - -
Lele07g1487 594 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 156 488 - -
Lele07g1487 594 MobiDBLite consensus disorder prediction 53 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1487 Lele-ChrLele07 9073186 9077512 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1487 07 9073186 9077512 Lele13g1954 13 27064711 27066898 CCT
Lele07g1487 07 9073186 9077512 Lele14g1883 14 25391982 25394171 CCT
Lele07g1487 07 9073186 9077512 Lele15g0456 15 2649019 2651217 CCT
Lele07g1487 07 9073186 9077512 Lele16g0478 16 2618238 2620395 CCT
Lele05g1423 05 9039267 9044188 Lele07g1487 07 9073186 9077512 hybridization
Lele06g1285 06 8192004 8196193 Lele07g1487 07 9073186 9077512 hybridization