Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1954 ATGGTCACTTCAATCTCCGGCGTTGTCATTCCCCTGTCCAGGCTCCAACTCCAGCCTGACTTCCCATCCTACAACAAATCCCCAGCTCCGTTATCCCTCGCACATAACAAGTCTCTATCTATAGCCACAGAATTACCTACAAGAAAATCTACTATATGCAAGGTTCTGTCCGAATCAAACCCGTCCCTGTCATCGATGATCACCGAGCTCGAGAGGGAACCAGTACGAGCAGATGGAGACGAAGAACAACAAGTTGACCGCCAGGCGCGTCTCAGAGAATCACACGAAGCGGAATTAGCTGATGTGTGGCGAGACATCCACGGCGAAAACGACTGGGCGGGGCTTCTTGATCCCATGAACCCACTTCTACGCTCGGAACTGATTCGCTACGGTGAAATGGCTCAAGCCTGCTACGATGCTTTCGATTACGACCCCTTTTCCAAGTACTGCGGAAGCTGCCGATTCACCCATCGCAAGTTCTTCGATTCCTTGGGTATGACTCGACTCGGCTACGACGTCACGCGCTACCTCTACGCCACCGCCCACATCGACCTCCCCAACTTCTTCAAGCAGTCCCGATGGCCTAGAATGTGGAGCAACAGCGCTAACTGGGCAGGATACGTCGCCGTCTCCGACGACCAAACCACCAAACGACTTGGCCGCAGAGACATAACAATTGCATGGAGAGGAACGGTGACCCGGCTGGAATGGATCGCGGACCTGATGGATTTCCTCAAACCCATCTGCTCCAACAACATCCCCTGCCCGGACCAATCCGTAAAAGTCGAATCTGGTTTCGTGGATCTTTACACCTCGAAGGACGGTGCATGCCGAGCAGTGCCGGTTTCTGTGTTCTCATTTTCGGGTCCGAGAGTGGGGAACGTGAGGTTCAAGGAGAGGTTGGAGTGGCTGGGAGTGAAGGTTCTGAGGGTGTTTAATGCGCACGATATGGTGCCCAAGTCACCAGGGTTTCTGTTCAACGAACAGGTGCCGTCGACGTTGATGAAGTTGGCCGAGGCTTTGCCGTGGAGCTATTCACATGTTGGGGTGGAGTTGCAGTTGGACGACCACAACTCGCCGTTTCTGAAGCCCAACAACGACCCCATTTGTGCCCATAACTTGGAGGCTCTCCTGCATTTGCTTGACGGATACCACGGAAGAGGGGAGAGATTTGTGCTGGCGAGTGGGAGGGACCCTGCGCTGGTGAACAAGGCATGCGACTTCTTGAAAGATCATTACTTGGTGCCGCCATGCTGGAAGCAAGACGAGAACAAGGGCATGATCCAGAACAGGGATGGACGCTGGGTGCAGCCTGAACGCCCTAACCTCGACGATCATCCCCACGATATTCGTCTTCATCTCTTCCAATTAGGCCTTGCTTCCTCTGATATCTGA 1395 0.5369 MVTSISGVVIPLSRLQLQPDFPSYNKSPAPLSLAHNKSLSIATELPTRKSTICKVLSESNPSLSSMITELEREPVRADGDEEQQVDRQARLRESHEAELADVWRDIHGENDWAGLLDPMNPLLRSELIRYGEMAQACYDAFDYDPFSKYCGSCRFTHRKFFDSLGMTRLGYDVTRYLYATAHIDLPNFFKQSRWPRMWSNSANWAGYVAVSDDQTTKRLGRRDITIAWRGTVTRLEWIADLMDFLKPICSNNIPCPDQSVKVESGFVDLYTSKDGACRAVPVSVFSFSGPRVGNVRFKERLEWLGVKVLRVFNAHDMVPKSPGFLFNEQVPSTLMKLAEALPWSYSHVGVELQLDDHNSPFLKPNNDPICAHNLEALLHLLDGYHGRGERFVLASGRDPALVNKACDFLKDHYLVPPCWKQDENKGMIQNRDGRWVQPERPNLDDHPHDIRLHLFQLGLASSDI 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1954 464 Gene3D alpha/beta hydrolase 102 277 IPR029058 -
Lele13g1954 464 Gene3D alpha/beta hydrolase 278 450 IPR029058 -
Lele13g1954 464 SUPERFAMILY alpha/beta-Hydrolases 118 372 IPR029058 -
Lele13g1954 464 Pfam Lipase (class 3) 279 324 IPR002921 GO:0006629
Lele13g1954 464 PANTHER PHOSPHOLIPASE A1-IBETA2, CHLOROPLASTIC 72 276 - -
Lele13g1954 464 CDD Lipase_3 159 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1954 Lele-ChrLele13 27064711 27066898 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g1954 21 383 Acyl Lipid Metabolism Gene Families AT1G06800 46.804 1.04e-114 343
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1285 06 8192004 8196193 Lele13g1954 13 27064711 27066898 CCT
Lele07g1487 07 9073186 9077512 Lele13g1954 13 27064711 27066898 CCT
Lele08g1281 08 8149149 8153356 Lele13g1954 13 27064711 27066898 CCT
Lele13g1954 13 27064711 27066898 Lele15g0456 15 2649019 2651217 hybridization
Lele13g1954 13 27064711 27066898 Lele16g0478 16 2618238 2620395 hybridization