Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0422 ATGGCAAAGAAACCCGTCAAATATTCCGTGGTGGACGCCTTCACCGAGTTACCTTTCAAGGGGAACCCCGCAGCAGTGTGCCTATTAGAAGAAGAGAGGGACGATAAGTGGTTGCAAGCGGTGGCCGCCGAGTTCAATATCTCGGAGACCTGTTACTTGACTCGAATTGCTGAGTCTGAGGGCCCCGCCAACTTGATCAATGCCAGCTCTAATCCTCGTTTCCGTCTTAGATGGTTCACTCCCGTCTGTGAGGTTGAACTTTGTGGCCATGCTACATTAGCTGCTGCACACACGCTCTTTTCTTCTGGTTCAGTGGCTTCCAATATCATTGAATTTGTGACGTTATCTGGAGTATTGACTGCAAAAAAGGTAACAGATATTAGCACCGCATCGTTAAAGGGTGTTTCCATAGTTGAAATAAGGAGGACATCCATCGGGGATGACCTATTGGTCGAAGTCACGTCCGGGAAATCTGTCGTAGAATTTAAGCCACAATTTGAGGCTATAGTGAAATGTCCTGGAAGAGGGATAATTGTCCCTGCAGTCGCTCCTTCGCTCTCAGGATTTGACTTCTACAGCAGATTCTTCTGCCCAAAATACGGAATCAATGAGGATCCTGTCTGTGAGAGTGCACATTGTGCTTTAGCGTCTTATTGGAGGAAGAAACTTGGCAAGTTTGATTTATGCTTATCAGGCATCAGCAAGTGGCGGAGTTATCAATATTCTTCATGA 732 0.4645 MAKKPVKYSVVDAFTELPFKGNPAAVCLLEEERDDKWLQAVAAEFNISETCYLTRIAESEGPANLINASSNPRFRLRWFTPVCEVELCGHATLAAAHTLFSSGSVASNIIEFVTLSGVLTAKKVTDISTASLKGVSIVEIRRTSIGDDLLVEVTSGKSVVEFKPQFEAIVKCPGRGIIVPAVAPSLSGFDFYSRFFCPKYGINEDPVCESAHCALASYWRKKLGKFDLCLSGISKWRSYQYSS 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0422 243 Pfam Phenazine biosynthesis-like protein 11 125 IPR003719 GO:0003824|GO:0009058
Lele16g0422 243 Pfam Phenazine biosynthesis-like protein 137 225 IPR003719 GO:0003824|GO:0009058
Lele16g0422 243 PIRSF Ismrse_PhzF 126 228 IPR003719 GO:0003824|GO:0009058
Lele16g0422 243 PIRSF Ismrse_PhzF 4 142 IPR003719 GO:0003824|GO:0009058
Lele16g0422 243 SUPERFAMILY Diaminopimelate epimerase-like 6 230 - -
Lele16g0422 243 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 132 234 - -
Lele16g0422 243 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 8 131 - -
Lele16g0422 243 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 7 126 IPR003719 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0422 Lele-ChrLele16 2278952 2280985 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele16g0422 16 2278952 2280985 Lele05g1492 05 9555996 9562512 CCT
Lele16g0422 16 2278952 2280985 Lele07g1553 07 9574213 9576139 CCT
Lele16g0422 16 2278952 2280985 Lele08g1343 08 8581144 8584131 CCT
Lele13g2005 13 27382528 27390686 Lele16g0422 16 2278952 2280985 hybridization
Lele14g1940 14 25715965 25718080 Lele16g0422 16 2278952 2280985 hybridization