Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1940 ATGGCGCAGAAAGCCGTCAAATATTCCGTGGTGGACGCCTTCACCGAGTTACCTTTCAAGGGGAACCCCGCAGCAGTGTGCCTATTAGAGGAAGAGAGGGACGATAAGTGGTTGCATGCGGTGGCCGCCGAGTTCAATATCTCGCAGACCTGTTACTTGACTCGAATTGCTGAGTCTGAGGGCCCCGCCAACTTGATCAATGCCACCTCTAATCCTCGTTTCCGTCTTAGATGGTTCACTCCCGTCTGTGAGGTTGAACTTTGTGGCCATGCTACATTAGCTGCTGCACACACGCTCTTTTCTTCTGGTTCAGTGGCTTCCAATATCATTGAATTTGTGACGTTATCTGGAGTATTGACTGCAAAAAAAGTAACAGATATTAGCATCGCATGTACCTCTGACTTGGAAAATGATGAAAATCAAGACAGATATTACATTGAATTGGATTTTCCTGCTGACGCTACTACAGAATTTCATTCTACTGAGACTTCACAGATTTCGGCAGCGTTACAGGGTGTTTCCATAGTTGAAATAAGGAAGACATCCATCGGGGATGACCTATTGGTCGAAGTCACGTCCGGGAAATCTGTCGTAGAATTTAAGCCACAATTTGAGGCTATAGTGAAATGTCCTGGAAGAGGGATAATTGTCACTGCAGTCGCTCCTTCCCGCTCAGGATTTGACTTCTACAGCAGATTCTTCTGCCCAAAATACGGAATCAATGAGGATCCTGTCTGTGGGAGTGCACATTGTGCTTTAGCGTCTTATTGGAGCAAGAAACTTGGCAAGTTTGATTTGAATGCTCATCAGGCATCAGCAAGAGGCGGAGTTATCAATATTCATCATGATGAGCAGAAGCAAAGGGTGCTATTGCGAGGGAAAGCCGTTACAGTGATGGAAGGATGTATTCTAGTTTAG 918 0.4564 MAQKAVKYSVVDAFTELPFKGNPAAVCLLEEERDDKWLHAVAAEFNISQTCYLTRIAESEGPANLINATSNPRFRLRWFTPVCEVELCGHATLAAAHTLFSSGSVASNIIEFVTLSGVLTAKKVTDISIACTSDLENDENQDRYYIELDFPADATTEFHSTETSQISAALQGVSIVEIRKTSIGDDLLVEVTSGKSVVEFKPQFEAIVKCPGRGIIVTAVAPSRSGFDFYSRFFCPKYGINEDPVCGSAHCALASYWSKKLGKFDLNAHQASARGGVINIHHDEQKQRVLLRGKAVTVMEGCILV 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1940 305 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 10 301 - -
Lele14g1940 305 SUPERFAMILY Diaminopimelate epimerase-like 6 304 - -
Lele14g1940 305 PIRSF Ismrse_PhzF 4 305 IPR003719 GO:0003824|GO:0009058
Lele14g1940 305 Pfam Phenazine biosynthesis-like protein 11 301 IPR003719 GO:0003824|GO:0009058
Lele14g1940 305 TIGRFAM PhzF_family: phenazine biosynthesis protein, PhzF family 7 303 IPR003719 GO:0003824|GO:0009058
Lele14g1940 305 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 152 293 - -
Lele14g1940 305 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 7 305 IPR003719 GO:0003824|GO:0009058
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1940 Lele-ChrLele14 25715965 25718080 Dispersed/Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele14g1940 14 25715965 25718080 Lele05g1492 05 9555996 9562512 CCT
Lele14g1940 14 25715965 25718080 Lele07g1553 07 9574213 9576139 CCT
Lele14g1940 14 25715965 25718080 Lele08g1343 08 8581144 8584131 CCT
Lele14g1940 14 25715965 25718080 Lele15g0400 15 2298563 2300211 hybridization
Lele14g1940 14 25715965 25718080 Lele16g0422 16 2278952 2280985 hybridization