Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2005 ATGTTGGAGTATGTAAGACTGAGACGGTTGAATCTGGCAATATTTCCATGTGGAAAAATAGTCGAGATGATTATTACGCGTATAAGTATGGGTAATGCTAGTAACCATGATTACGGGAATGTTGTTATTGGCCCCTCAAGCCTTTTTACCATAACAACGTTGGCCCAGCGTGTTCATTATAGACCTATAAACCCAATAGCGTTGAAGCGAATGGATTTTAGGGATATGATAGAATCTACAAAGAAAATTATAAATGATGTGGCAGACGATTATTCTTGGCATTCAAGTGACACCACTCTTGGGCAACTAGGCCTCGAAACTTTTCGTTTTATGTCGTTTCCGTTACAAGTGAATCCAAATTTTAGGCATGCGGGGCTGGATGTGACGCCAGAGCCATGTCCCAGTACCGATCCATTAAAGGCGATAATGTTTTCAGTCTCCCTCGCATCATTCCTTACGCCCTTCTCACCCCACTCGCCTTTTGCATTCATATATACTGCCTCCAACTCAGTTTACTTCACTTATATCATTGTCACGTCTACATTATCAATTGTTCGGAGGGAAACGAATGAGCCTTTCACCTTTTCTTGTGTTTCTCAGGAATCTGTGCTCTTACGTTTGACCAGATCTTGGCTAAGGATACGTAAAAAGACAAGTGCAGTTTCAAAGATTTCGTGGCAGTACTGGATAAAGCACATCACCTCTGGTGTTTCCAAGATTGCTATGCTTGGATTCATAGATTGCGTTGACTCTTCCTTCTCTCGATCGAATAATCCTCTCTTTCTCTCGTCAATGGCAATGAAACCCGTCAAATATTCGTTGGTGGACGCGTTCGCCGAGTTACCTTTCAAGGGGAACCCCGCAGCAGTGTGTCTGTTAGAGGAAGAGAGGGATGAGAAGTGGATGCAAGCGGTGGCCACTGAGTTCAATATCTCGGAGACCTGTTACTTGACTCGAATCGCTGAGTCAGAGGGCCAGGCCAACTTGATCAATCCCAGCTCTAATCCTCGTTTCCGTCTCAGATGGTTCACTCCCGTCTGTGAGGTTCCACTTTGTGGCCATGCTACATTAGCTGCTGCACACACGCTCTTTTCTTCTGGTTTAGTGGCTTCCAATATCGTTGAATTTGTGACGTTATCTGGAGTATTGACGGCAAAAAAAGTACCAGATATTAGCACCGCATGTGCCTCTGACTTGGAAGACGGTGAAAATCAAGTTCAAGACAGATATTACATTGAATTGGACTTGCCTGCTGACCCTCTCACAGAATTTCATTCTATTGAGACTTCACAAATTTCGGCAGCGTTAAATGGTGCTTCCATAGTTGAAATGAGGAGGACATCCATCGGAGGTGACCTATTGGTCGAAGTCACGTCTGGGAAATCTGTCGTAGAATTTAAGCCACAATTTGATGCTATAGTGAAATGTCCTGGAAGAGGGATAATTGTCACTGCAGTTGCTCCTTCAGGCTCAGGATTTGACTTCTACAGCAGATTCTTCTGCCCAAAATGCGGAATCAACGAGGATCCTGTTTGTGGAAGTGCACACTGTGCTTTAGCATCTTATTGGAGCAAGAAACTTGGCAAGTTTGATTTCAATGCTTATCAGGCTTCACCTAGAGGCGGAGTTCTCAATATTCATCATGATGAGCAGAACCAAAGGGTGCTATTACGAGGGAAAGCCGTTACAGTGATGGAAGGATTTATTATAGTTTAATGGACGTGTTCGCCTGAGCTACCTTTCAAGGGGAACACCGCAGAAGTGTGTCTATTAGAGGAAGAGAGGGATGATAAGGGGATGAAAGTGGTAGCCACTGAGTTCAATGTCTCAGAGACTGGTTACTTGAGTCGAATTTCTGAGTCAGAGGGCCCAGACAACTTGATCAATGCAAGCTTGAATCGTCGTCTCCGTCTTAGATGGTTCACTCGCGTCTGTGAGTTGAATTTGTCACGTTATCTGGAGTATTCGCTGCTAAAAGAAGTACCGGATGTTATCACCTCATGTGCCTCTAACTTGGAAGATGGTGAAAATCAAGTTCAAGACAGATATTACATTGAACTGGATTTTCCTGCTGACCCTCCTACAGAATTTCATTCTATTGAGACTTCACAAAATTCGGCAGCGTTAAATGGTGCTTCCATATTTGAAATAACGAGGAGATCCATCGGAGATGACCTATTGGATCCTGTTATCGGGAGTGCATACTGTGGTTTAGCATCTTATTCTAGTTTACTCCTGCTTTTGGCATTGTAA 2253 0.4372 MLEYVRLRRLNLAIFPCGKIVEMIITRISMGNASNHDYGNVVIGPSSLFTITTLAQRVHYRPINPIALKRMDFRDMIESTKKIINDVADDYSWHSSDTTLGQLGLETFRFMSFPLQVNPNFRHAGLDVTPEPCPSTDPLKAIMFSVSLASFLTPFSPHSPFAFIYTASNSVYFTYIIVTSTLSIVRRETNEPFTFSCVSQESVLLRLTRSWLRIRKKTSAVSKISWQYWIKHITSGVSKIAMLGFIDCVDSSFSRSNNPLFLSSMAMKPVKYSLVDAFAELPFKGNPAAVCLLEEERDEKWMQAVATEFNISETCYLTRIAESEGQANLINPSSNPRFRLRWFTPVCEVPLCGHATLAAAHTLFSSGLVASNIVEFVTLSGVLTAKKVPDISTACASDLEDGENQVQDRYYIELDLPADPLTEFHSIETSQISAALNGASIVEMRRTSIGGDLLVEVTSGKSVVEFKPQFDAIVKCPGRGIIVTAVAPSGSGFDFYSRFFCPKCGINEDPVCGSAHCALASYWSKKLGKFDFNAYQASPRGGVLNIHHDEQNQRVLLRGKAVTVMEGFIIVXWTCSPELPFKGNTAEVCLLEEERDDKGMKVVATEFNVSETGYLSRISESEGPDNLINASLNRRLRLRWFTRVCELNLSRYLEYSLLKEVPDVITSCASNLEDGENQVQDRYYIELDFPADPPTEFHSIETSQNSAALNGASIFEITRRSIGDDLLDPVIGSAYCGLASYSSLLLLLAL 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2005 750 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 418 559 - -
Lele13g2005 750 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 574 650 - -
Lele13g2005 750 Pfam Phenazine biosynthesis-like protein 579 649 IPR003719 GO:0003824|GO:0009058
Lele13g2005 750 Pfam Phenazine biosynthesis-like protein 275 567 IPR003719 GO:0003824|GO:0009058
Lele13g2005 750 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 274 567 - -
Lele13g2005 750 SUPERFAMILY Diaminopimelate epimerase-like 580 649 - -
Lele13g2005 750 PANTHER PHENAZINE BIOSYNTHESIS PROTEIN 580 725 IPR003719 GO:0003824|GO:0009058
Lele13g2005 750 SUPERFAMILY Diaminopimelate epimerase-like 270 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2005 Lele-ChrLele13 27382528 27390686 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2005 13 27382528 27390686 Lele05g1492 05 9555996 9562512 CCT
Lele13g2005 13 27382528 27390686 Lele07g1553 07 9574213 9576139 CCT
Lele13g2005 13 27382528 27390686 Lele08g1343 08 8581144 8584131 CCT
Lele13g2005 13 27382528 27390686 Lele15g0400 15 2298563 2300211 hybridization
Lele13g2005 13 27382528 27390686 Lele16g0422 16 2278952 2280985 hybridization