Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0420 ATGGAGAGAATGAAGATTATAAACTTAATGACAATAGTAGGATTGGCATTGCTGGCATTAGTGCCGAAGATGGAGAGCCTGGGTATTGGGGCACCAGCAGAGCCTAGGCCACTTTGTGCATCTCAATTTGCACTTGCTAACTATGCTTGTTCAAGGCTTCCTTTCACTCCGGGAACCCCGCCGTCTCCTCGGTTCCCTCCGTCACCGGACGAGGACCATAGCCATCGACACGGACACAGACATGGACACAGACACAGACACCATCACCACACAAGTCAAGAAGAGGGTTGTTGCAGGTGGGTTAAGGAAGTGGATAGCCAGTGTGTGTGTGAGGTTTTGCTTCGCTTGCCTCCCTTCCTTGTCAGGCCTGTTCATCAGTACACAGTCACCTTTGGAGATTTCTGTAATACTACTTATTTCTGCGGAGGGCCCATTTGA 438 0.5 MERMKIINLMTIVGLALLALVPKMESLGIGAPAEPRPLCASQFALANYACSRLPFTPGTPPSPRFPPSPDEDHSHRHGHRHGHRHRHHHHTSQEEGCCRWVKEVDSQCVCEVLLRLPPFLVRPVHQYTVTFGDFCNTTYFCGGPI 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0420 145 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 72 143 - -
Lele16g0420 145 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 85 139 IPR036312 -
Lele16g0420 145 MobiDBLite consensus disorder prediction 57 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0420 Lele-ChrLele16 2270523 2270960 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1360 06 8726819 8730470 Lele16g0420 16 2270523 2270960 CCT
Lele07g1567 07 9657924 9661872 Lele16g0420 16 2270523 2270960 CCT
Lele08g1356 08 8658035 8667428 Lele16g0420 16 2270523 2270960 CCT
Lele16g0420 16 2270523 2270960 Lele05g1496 05 9586340 9586750 CCT
Lele16g0420 16 2270523 2270960 Lele06g1351 06 8658335 8662234 CCT
Lele16g0420 16 2270523 2270960 Lele07g1557 07 9599274 9599684 CCT
Lele16g0420 16 2270523 2270960 Lele08g1347 08 8609168 8609970 CCT
Lele13g2007 13 27396147 27396599 Lele16g0420 16 2270523 2270960 hybridization
Lele14g1942 14 25725926 25726466 Lele16g0420 16 2270523 2270960 hybridization