Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1360 ATGGGTTTCAACGCGGTCTACAAATGCTTGCAGGAGATATTTCCACAGGTTGATGCCAGGATTCTCAGGGCTGTGGCTATTGAGCACGCTAAGGATGTTGACTTAGCTGCAGGAATTGTCTTGAATGAAGTCATTCCTCTAATGTCTAAAAGGTCCATGCCTCTCACAACTCCTCCACATGATAAGGGTCCTGAAACTGTAGCAAATGTAGAAGTTGGACAAGGGAATCGGTCGAGGCATGAACAGTTTGTTGAAACTGTAGCTGCTGAAAATTTAGAAACCGCATCCTATCCTATGGGGCCATATAAAAGCCTGATTTTCGAAGGAACTGAAGTTCCAAAAACTTGTAATTCCAATGGCAGAGCTGATAAGTTTCTCAAAATTAATGAAAGCGAGAAGCAATATACCTTGGGTAAGGTTGGAGAAAACTTATCAGTAGACGTCACAAATAAGATTGCAGAGAATGCAGAAAATGGTTTGAAGCACAATGCTAGTGGAAGCTGTGATCATGAACTAGAACGTGCAGATGTTGAGAGTGAAAATCTGTTTTCCTGTGGCACATGCCATGAAATGCAACGTTCTCCGATGAACGACAATGGTAATGAAAAGGAGGGGAAATATTTTGCAGGTCCTACAACAGCTGATAATTATGATACTATTACCTGTTCTATAAGCCACAAATCTGTGAGTTGTGAACCTTCCTTGATTGAGGGAGAAAGCTGTGAGGTTGAAGCAGTCGATCAAGCTCAAAGACATTTGCCAAAATCTAAAGAATTTGGTCTTCAATCAGAACTCGATGGTAGCACTCCTATTGCTTCGGAAAGAAATATGGAGGGTGCTTGTTCTTTTTCTGAACAAGAGTACTCTGTGAGCAAAGCCGGTTATGTTGAAGATGAGATCAGTGGGGAAGATGTGGTTAGCCAGGCTAATCAAGTATGCGGAATTGATCTGCTTGAAGAGATCATTGATGAAGCTAAAACTAACAAGAAAACCCTGTTCTCGTCAATGGAATCTCTTGTCAGCTTAATGAAAGAAGTGGAACTTCAGGAGAAAGCAGCAGAACAATCCAAAATAGAAGCTGCACTTGGAGGATCTGAGATTCTTATTAATGTAGAAGAACTGAAAAAGATGTTGATGCATGTGAAAGAAGCAAATGACATGCATGCAGGAGAAGTTTATGGAGAAAAGGCAATTTTAGCTGCTGAAATGAAGGAACTTCAATCTCGTTTGCTCAGTTTGTCAGATGAAAAGAATAAGTCACTTGCAATTCTTGATGAGATGAGCCAATCTCTTCGAGTTCGGTTAGCTGCAGCTGAAGAACTGAGGAAAGCAGCTGAGCAGGAAAAGTTAGAAAAGGAGGAATCTGCAAGAAAGGATCTTGCTGAACAGGAAGCAATCATGGAGAGGGTGGTTCAAGAATCGACAAGACTGCAACTGGAAGCAGAAGAAAATTGCAAGTTGCGGGAGTTCCTCATTGACCGTGGACAAGTTGTGGATATGTTGCAGGGAGAAATTTCTGTTATTTGTCAGGACATCAGGATTCTCAAGGCGAAATTTGATGCAAATCTCCCCTTGAGCAAATCCTTCACCTCAAGCCAGACTAGCTGTATCTTAGCTTCGTCAGGTTCATCTCACAAAAGCTTGGCAACCGATGCTGGCTCATATCACAGTGATTCATCTGAAGAACTTAAGACAAAGGCAGCGTCCTCAACTGGTGAACTGTCCTCCGAAAGTGGGAATAAAGAGAAAAGTAGGAAAATTGAACATAAGACTCCTCTAGATGATGAGTGGGACTTTATCATAGCGGAAGTATAA 1815 0.4171 MGFNAVYKCLQEIFPQVDARILRAVAIEHAKDVDLAAGIVLNEVIPLMSKRSMPLTTPPHDKGPETVANVEVGQGNRSRHEQFVETVAAENLETASYPMGPYKSLIFEGTEVPKTCNSNGRADKFLKINESEKQYTLGKVGENLSVDVTNKIAENAENGLKHNASGSCDHELERADVESENLFSCGTCHEMQRSPMNDNGNEKEGKYFAGPTTADNYDTITCSISHKSVSCEPSLIEGESCEVEAVDQAQRHLPKSKEFGLQSELDGSTPIASERNMEGACSFSEQEYSVSKAGYVEDEISGEDVVSQANQVCGIDLLEEIIDEAKTNKKTLFSSMESLVSLMKEVELQEKAAEQSKIEAALGGSEILINVEELKKMLMHVKEANDMHAGEVYGEKAILAAEMKELQSRLLSLSDEKNKSLAILDEMSQSLRVRLAAAEELRKAAEQEKLEKEESARKDLAEQEAIMERVVQESTRLQLEAEENCKLREFLIDRGQVVDMLQGEISVICQDIRILKAKFDANLPLSKSFTSSQTSCILASSGSSHKSLATDAGSYHSDSSEELKTKAASSTGELSSESGNKEKSRKIEHKTPLDDEWDFIIAEV 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1360 604 PANTHER OS05G0394900 PROTEIN 1 45 - -
Lele06g1360 604 MobiDBLite consensus disorder prediction 544 589 - -
Lele06g1360 604 Coils Coil 428 480 - -
Lele06g1360 604 Coils Coil 396 416 - -
Lele06g1360 604 Coils Coil 339 359 - -
Lele06g1360 604 CDD CUE 10 41 - -
Lele06g1360 604 ProSiteProfiles CUE domain profile. 2 45 IPR003892 GO:0043130
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1360 Lele-ChrLele06 8726819 8730470 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1360 06 8726819 8730470 Lele13g2007 13 27396147 27396599 CCT
Lele06g1360 06 8726819 8730470 Lele14g1942 14 25725926 25726466 CCT
Lele06g1360 06 8726819 8730470 Lele15g0397 15 2284527 2284973 CCT
Lele06g1360 06 8726819 8730470 Lele16g0420 16 2270523 2270960 CCT
Lele06g1360 06 8726819 8730470 Lele06g1360 06 8726819 8730470 ECH
Lele06g1360 06 8726819 8730470 Lele07g1567 07 9657924 9661872 hybridization
Lele06g1360 06 8726819 8730470 Lele08g1356 08 8658035 8667428 hybridization