Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1496 ATGAAGAGGGTTCCATCACTCAAATATACAGCAATTACGATTGCTATGTTATGCCTGTGGATTGTTGTCGCTGAGTGTGTTCCAGATACCACCATCATGAATGTTCTCTGCAACGACGGGGTCTTCACCTCCGGCGATCCTTTCGCTATTAGCCTCAACTATGTTCTTCAAGAACTTGAGACGGTGACTTCAACTCGGAGAAATTACGATTACTCCAACATTTCTCCTTATCCTAATGCCTTTGCCTATGGCCATGCTGCTTGTAACACCAATCTCACCATCTCTGATTGCAACACTTGTCTTGCCGCTGCCAAAACGGCCTTGTTCACTACGTGTCAGAGTCGGATTGGGGCTCGCTCCTCGCTCCGGGATTGTGCGCTCAGGTATGAGCAATACCCATTTGATGATTAG 411 0.472 MKRVPSLKYTAITIAMLCLWIVVAECVPDTTIMNVLCNDGVFTSGDPFAISLNYVLQELETVTSTRRNYDYSNISPYPNAFAYGHAACNTNLTISDCNTCLAAAKTALFTTCQSRIGARSSLRDCALRYEQYPFDD 136
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1496 136 PANTHER ANTIFUNGAL PROTEIN GINKBILOBIN-2-LIKE 11 134 - -
Lele05g1496 136 FunFam Antifungal protein ginkbilobin-2 29 134 - -
Lele05g1496 136 Gene3D - 24 134 IPR038408 -
Lele05g1496 136 Pfam Salt stress response/antifungal 40 132 IPR002902 -
Lele05g1496 136 ProSiteProfiles Gnk2-homologous domain profile. 30 134 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1496 Lele-ChrLele05 9586340 9586750 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1496 30 136 Receptor kinase-like Gene Family AT5G40380 30.973 5.30e-07 45.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2007 13 27396147 27396599 Lele05g1496 05 9586340 9586750 CCT
Lele14g1942 14 25725926 25726466 Lele05g1496 05 9586340 9586750 CCT
Lele15g0397 15 2284527 2284973 Lele05g1496 05 9586340 9586750 CCT
Lele16g0420 16 2270523 2270960 Lele05g1496 05 9586340 9586750 CCT
Lele05g1496 05 9586340 9586750 Lele05g1496 05 9586340 9586750 ECH
Lele05g1496 05 9586340 9586750 Lele07g1557 07 9599274 9599684 hybridization
Lele05g1496 05 9586340 9586750 Lele08g1347 08 8609168 8609970 hybridization