Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1110 ATGACGCGACACGGGGCGAGGGGTTACAACTTGGAGCCTGGAGTGGAATTCTTAAGGGCGGGAAAATTGCTTTTCCCCCAAACACACTGTATTTATTATTACTGCTATATCCCTTTGGAATCTCCAGTAAAAGACAAACATAACAAGGCTGTGGCAGCGAGTTCAGCAATGGGAAGAAGTCTCAGTCCAGTAATCCGGCGAGAGCTCGCAAATCTTGACAAAGATGCGGACAGCCGAAAGTGTGCAATGAAAGCCCTAAAGTCATACGTGAAAGACTTGGATTTTAAGACCATTCCTATCTTCCTCGCCCAAGTTTCTGAAACCAAGGATACCGGCTCATTATCGGGAGAATTCACGATTTCACTCTATGAAGTTCTTGCTCGAGTTCATGGGGTCAAGATTGTTCCTATGATAGACAGCATCATGGCATCCATAGTACAAACCTTAGCTTCAAGTGCAGGGTCTTTCCCACTTCAGCAGGCTTGCTCAAAGGTGGTCCCAGCTATTGCAAGATATGGAATTGACCCCACAACCCCAGAAGACAGAAAGAGGCATATAATTCATTCCCTTTGTAATCCACTTTCTGATTCTCTCACTTCCTCTCGTGAGATCCTAGCTTCAGGAGCATCCCTTTGCTTAAAGGCTCTTGTGGATTCAGATAACTGGAAGTTTGCTTCAGATGACGTAGTCAATAGGGTCTGCCTGAATGTTGCTGTAGCTTTAGAGGGGAGGTCTCCCCAGAATAACACACATTTGGGTTTGGTAATGGCCTTAGCTAAACGCAATGCTTTGATTGTTGAAGCATATGCAAGATTGCTTATTCAATCTGGATTGAGAATATTGAATGCTGGGCTTATGGAGGGGAATTCTCAGAAGAGATTGTCAGCCATTCAAATGGTAAACTTCTTGATGAAATGTCTAGACCCCCGAAGCATATTCTCAGAACTGGATTTGATCATTCTGGAGATGGAGAAGTGCCAGTCTGATAAAATGGCATACGTGAAAGGTGCTGCTTTTGAAGCTTTGCAAACTGCTAAGAGAATTGCAGCTGACAAAAAATCAAGATATATTAAAAGTCCTGGTTCAGTGACTGGCTCAAATTTTAGCAAGGGAGACCACAATGAAGGGGAAAACTTTTCTTGTGAAGGAGAGCATACTCCTAGATCTATTTCACCAGAATCACGGACTCTGGACTTCTTTCCAGGATATGAATCAGTGAGCGAGTCGCCCATTGCAATGAGCCAAACTTCTCAGACTTCGAACTATGAGCGTCGAAGTGTAAATAGGAAGCTTTGGAGCCAGGAAAATGGAGGGGTTGACGTGTCTCTCAAGGATGGCCTCTTTTCAGAGGTTGTGAAGAGAAATGATATATCAAAAAAATGGTTAGAACAATCTGTGAATCATGAGGGTTTGGATAGGACAGATTCAACAGAGGAGTTTGCTGGATTCATGCATCAGAATCCTAGGTTTGGAGTATCCAGAAGCACCACCACAAGTCCGCTGAGGTCTCGAGCACAGGTTAATATAGACAAAATAAAATTCTTCAAGACTCCTAGAAAGCTCATTCAGTCTCTGCAAGACCCATTTGATGTGAATTCCGGTAGCTCATCTGGTAGCTCTGAGAAACAAAACAGACAGTTTAAGAGTTTATCCTCAGGCAATATTGAGTGGAATCCAACATCTGAATGTGACCAGAATGGTTTCTCACATGAAAATAATGATTCTAAAGAGAATGGAAGCTTATCATATGATGGTGGTTATAATGATGATGTTCAGATACAAGGGGGTCAGGAGTTAGTCTCAATAACAGATGAGCTTTCTGGTGAAGTTGACATGCAGATGCATCCTGAGGTAGTTCCCAGGAGTGAAAGCAATGCTCAGAGAATGGGCATGGAGAAAACTCTGCGAAGGGCTATGTTCAAATTGGTTTGTGGTCTCTCTTTTGCTCTACTTGCAGTGGCTACTCCTCTCGTATGGATCAACGGTCAGGACGAAGGCCATTATCTTGTCCCGACATAA 2019 0.4339 MTRHGARGYNLEPGVEFLRAGKLLFPQTHCIYYYCYIPLESPVKDKHNKAVAASSAMGRSLSPVIRRELANLDKDADSRKCAMKALKSYVKDLDFKTIPIFLAQVSETKDTGSLSGEFTISLYEVLARVHGVKIVPMIDSIMASIVQTLASSAGSFPLQQACSKVVPAIARYGIDPTTPEDRKRHIIHSLCNPLSDSLTSSREILASGASLCLKALVDSDNWKFASDDVVNRVCLNVAVALEGRSPQNNTHLGLVMALAKRNALIVEAYARLLIQSGLRILNAGLMEGNSQKRLSAIQMVNFLMKCLDPRSIFSELDLIILEMEKCQSDKMAYVKGAAFEALQTAKRIAADKKSRYIKSPGSVTGSNFSKGDHNEGENFSCEGEHTPRSISPESRTLDFFPGYESVSESPIAMSQTSQTSNYERRSVNRKLWSQENGGVDVSLKDGLFSEVVKRNDISKKWLEQSVNHEGLDRTDSTEEFAGFMHQNPRFGVSRSTTTSPLRSRAQVNIDKIKFFKTPRKLIQSLQDPFDVNSGSSSGSSEKQNRQFKSLSSGNIEWNPTSECDQNGFSHENNDSKENGSLSYDGGYNDDVQIQGGQELVSITDELSGEVDMQMHPEVVPRSESNAQRMGMEKTLRRAMFKLVCGLSFALLAVATPLVWINGQDEGHYLVPT 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1110 672 SUPERFAMILY ARM repeat 67 344 IPR016024 -
Lele15g1110 672 MobiDBLite consensus disorder prediction 527 588 - -
Lele15g1110 672 MobiDBLite consensus disorder prediction 361 395 - -
Lele15g1110 672 FunFam protein SINE1 isoform X1 58 370 - -
Lele15g1110 672 PANTHER MICROTUBULE-ASSOCIATED PROTEIN TORTIFOLIA1 58 576 IPR033337 GO:0005874|GO:0008017
Lele15g1110 672 MobiDBLite consensus disorder prediction 527 587 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1110 Lele-ChrLele15 6435539 6440063 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0503 06 3057560 3060948 Lele15g1110 15 6435539 6440063 CCT
Lele05g0678 05 4005229 4011441 Lele15g1110 15 6435539 6440063 CCT
Lele13g1334 13 23323299 23325217 Lele15g1110 15 6435539 6440063 hybridization
Lele14g1239 14 21641592 21649221 Lele15g1110 15 6435539 6440063 hybridization