Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0965 ATGACACGAGGTGCTGTTCATGAGATCAGACAATTGCAGATGATGTTAAGGCACCTGACAAACAACCTTACATTTCAAGAAGCTTATGACATGACAGGTCGAATTTTTGGGATAGCAGTTTACTCCCCAAGAAGACATGAACCACCTAGATGTCTTAACTACTTGACCTCACCCAATGTTGTTATATGGAGCGCGGTCACTGCTTCTTGTGCTTTTCCTGGCCTTTTTGAGGCTCAGGAACTAATGGCAAAGGATAGAAGTGGAGATATTATTCCTTACCATCCTCCATTTAATTTGGGCCCTGAGGAAGGGTCTACACCCATACGTAGCTGGAGGGATGGGAGCCTGGAGATTGATCTAACTATGATGCAGCTAAAAGAGCTGTTTAATGTCAATCACTTTATTGTCAGTCAGGCCAATCCTCATATTTCACCATTGCTAAGATTGAAAGACTTTGTAAGAGCTTATGGAGGCAATTTTGCTGCCAAGGCATGTAATCATGGACTTGTCACTTTTAAATCCCCATTTCCACCCCAAAAATAA 543 0.4236 MTRGAVHEIRQLQMMLRHLTNNLTFQEAYDMTGRIFGIAVYSPRRHEPPRCLNYLTSPNVVIWSAVTASCAFPGLFEAQELMAKDRSGDIIPYHPPFNLGPEEGSTPIRSWRDGSLEIDLTMMQLKELFNVNHFIVSQANPHISPLLRLKDFVRAYGGNFAAKACNHGLVTFKSPFPPQK 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0965 180 Gene3D Cytosolic phospholipase A2 catalytic domain 3 144 - -
Lele15g0965 180 ProSiteProfiles Patatin-like phospholipase (PNPLA) domain profile. 1 126 IPR002641 GO:0006629
Lele15g0965 180 SUPERFAMILY FabD/lysophospholipase-like 4 149 IPR016035 -
Lele15g0965 180 PANTHER NEUROPATHY TARGET ESTERASE/SWISS CHEESE D.MELANOGASTER 1 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0965 Lele-ChrLele15 5628019 5628561 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0965 1 163 Acyl Lipid Metabolism Gene Families AT5G04040 84.242 8.38e-97 296
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0682 06 4156542 4157204 Lele15g0965 15 5628019 5628561 CCT
Lele07g0872 07 5117006 5117668 Lele15g0965 15 5628019 5628561 CCT
Lele08g0679 08 4188358 4189020 Lele15g0965 15 5628019 5628561 CCT
Lele13g1460 13 24099384 24102702 Lele15g0965 15 5628019 5628561 hybridization
Lele14g1385 14 22489183 22496349 Lele15g0965 15 5628019 5628561 hybridization