Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0397 ATGGAGAGAGTGAAGATTATAAACTTAATTACAATAGCAGGATTGGCATTGCTGGCATTAGTGCCCAAGATGGAGAGCCTGCGTATTGGGGCACCACCAGCAGAGCCTAGGCCACTTTGTGCATCTCAATTTGCACTTGCAAACTACGCTTGTTCAAGGCTTCCTGTCACTCCGGGAACGCCGCCGTCCCCTCCGTCCCCGGATGAGGAGCATAGCCATCGACAACGACACGGACACAGACACAGACACGGGCGCAGACACAGACACCATCATCACCACACTAGTCAAGAAGATGATTGTTGCAGGTGGGCTGGGGAAGTGGATAGCCAGTGTGTGTGTGAGATTTTGCTTCACTTACCTCCCTTCCTTGTCAGGCCCGTTCATCAGTACACAATCACCGTTGGAGATTTCTGTAATACTACTTATTCCTGCGGAGGACCCATTTGA 447 0.5101 MERVKIINLITIAGLALLALVPKMESLRIGAPPAEPRPLCASQFALANYACSRLPVTPGTPPSPPSPDEEHSHRQRHGHRHRHGRRHRHHHHHTSQEDDCCRWAGEVDSQCVCEILLHLPPFLVRPVHQYTITVGDFCNTTYSCGGPI 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0397 148 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-LIKE SUPERFAMILY PROTEIN 70 146 - -
Lele15g0397 148 MobiDBLite consensus disorder prediction 55 92 - -
Lele15g0397 148 MobiDBLite consensus disorder prediction 75 92 - -
Lele15g0397 148 SUPERFAMILY Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin 88 142 IPR036312 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0397 Lele-ChrLele15 2284527 2284973 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1360 06 8726819 8730470 Lele15g0397 15 2284527 2284973 CCT
Lele07g1567 07 9657924 9661872 Lele15g0397 15 2284527 2284973 CCT
Lele08g1356 08 8658035 8667428 Lele15g0397 15 2284527 2284973 CCT
Lele15g0397 15 2284527 2284973 Lele05g1496 05 9586340 9586750 CCT
Lele15g0397 15 2284527 2284973 Lele06g1351 06 8658335 8662234 CCT
Lele15g0397 15 2284527 2284973 Lele07g1557 07 9599274 9599684 CCT
Lele15g0397 15 2284527 2284973 Lele08g1347 08 8609168 8609970 CCT
Lele13g2007 13 27396147 27396599 Lele15g0397 15 2284527 2284973 hybridization
Lele14g1942 14 25725926 25726466 Lele15g0397 15 2284527 2284973 hybridization