Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1620 ATGTGGCATACCTTCTGGCGATCCATCGATCGCTTCTCCATTGAGCACTTCAAATCTGTCATCAATGAATTGCGGCGGATTAAAGTTGTAAATAAACATAACATGGAGCTAGTGATGGATTTACTGCAGTCCACTGTTGAGATAGTCACTTATGGTGATAGACAAGATCCTTTCATTTTTGAATGTTTCATGGAACACCAAGTACTAGCAGAATTCGTTCGTATACTAAAGATCAGTAGAAATTCAAAAATCGAGGCACCTTTGCTTCAATATCTGAGCATACTGATCCAAAATATGGATAGTGAACATTCAATCTATTATTGTTTCAGCAATGATTATATTAACAACATAATTTCACATCCATATATCTTTGATGGGGGAGACTTAGCTCCATACTACGTTTCTTTTCTAAGAGCTGTTAGCGGTAAGGTAAACAGAGACACACTTTGCCTGCTTGTGAAGGTTCATGGGGATGCTGTTGTTTCCTTTCCCTTGTATACTGAGGCTCTTAGGTTTGCTCATCATGAGGAAAGGATGATTAAGACTGCTATACGTGCATTAACTCTCAACATTTACAATGTTAGCGATGGCATGGTCTTTCAATTCATAACAACTCCTCCAGTTTCAAAGTACTTCTCAGACCTGGTTTGCAGACTAAGAGATATTTGCTTTCATTTAGACGCTTGTCTCCATTCTAGAGGCAGGGAGATGGACATGCAAAAGGGAAGAAACAGTCTGATTGCTGAATCTGATAAAGTTGCGGATGATCTATACTACCTTAAAGACATTCTTAGTGTTGGCGAGCCTTGTTTGAGTAGACTTGTTACTGAAAATCTTCTCGACATGCTTGTATTTCCAATAATAGTCTCATTACTGGCTCCAAAAGAGAACAATGACTCAGATCTATCTGCTATCACATCTCTATATATCCTGTCACTTCTTCTTCAAGTTGTTGGTGGAAGGTGCATAATCAATAATGTGGCTGGGGTTATCCTTTATCCTTTCTTGACCTTAAATGAGAGACATCTGAACGAAGGCAATGCATCTCTTGAACATAGTGGTGTTTATCCTTTTTCTAAGCATGTGAATGAAGCCAAAAGAGTTATGTGTTGTGCTCCTGAGTACAAAGGAGCAGAGGGCAATGACAGGAACTATGATGATGCTCGTATAGCAGATTTCATGTCTAGTTTCAATGTTAGCGGCTCCTCTGGGGATATTTATCTTAAAAGGGATGGAATACTTGCATATATTTTCTCTGACCATTATGTCATGCTGCTAGCTTCTCTATTTTTATTTCTTATTTTGTCAGAAAGTAAAGATCTTGATTGTGCCGTAGCTCCAGTGATTGGGTTATATAAGTTGCAGACTAATGATGCATCAACTTCTAAGTCCGCAGATGTAGGCATCTTCGTTAAATTTATGCCGGAGATTTTAAATGCTCTGTTGAAGGTTTTTGCCTTTCAGCAATCCCTCTCTGCGATGACACTGTGGCAAACAGGGTGGTGCTTTCTAAAGCTACTTAGCGTTCACAGAGAGGGACTTCATGGTGATAATCTCCACCTGTTCAATACTTCGTGCAAGCATTCCCGAGAAGGCTTTCTAAAAGAACTTGATGGAATTTGGTTTGATCATATTCCAAATGCTTTAAGAAGTCAATGGGCAAGTTGTAAAAGAGTTCTTGAGGAATCTTCCCAGCATAAAGATCCTTTATTCTTGTTGGAGCTCTCTCTCCACCAACAATCAATTAATGGTGAAACATCTTCATATTTTGCTTGGCAAGGGATGATTGATGCAGTGAAGGTTTATATTCTCCATTTCCAGCTGAAGTCATTTATTTCCAAAGGTGTATTAGTTGAGAATCCATTATTGCTGGGCAGTCCTACCACCAATGATTCTGGAGCAATCCATGCTTCAGATGTTTCAAATGCTAGCTTCGGATCAGATGTTTCCTTAGAATCTGGTACGCCCTGCAGAATTGCATTTTCCAATTCCGAACTCAGGGATATATACCTGATACCGGTGTCAAGTGGAATGGCTGGAAAGTTGCTTCTTGCCGAGAAACATCCTTTTCGCAGTCATCGGGGAGTTGTTATTGCAATTGCACCATTGGCGGGGTTGAGGCCTAAGATAGATGAGGAGCACCCTTCATGGTTGCGTCTTCGAATAAGAGAGTTTGATGCGGAGTTCTATAGTAACGAAGGAAATGGAAAGCACCTCAACCCATCCGATCATGTGACAGACGGGAGATGGACTCTTGGTTTCCCAAATAGAAAAGCGTGTGAGTCTGCTAAATTAACAATTATGAGTGAAATTACTAAGCAGAGATCAGCTGTGGAGTACATACTTGCGCCAATGCTTCAATATGATCTTGGATTAGCTGTAACTGAAAGCTGA 2394 0.4014 MWHTFWRSIDRFSIEHFKSVINELRRIKVVNKHNMELVMDLLQSTVEIVTYGDRQDPFIFECFMEHQVLAEFVRILKISRNSKIEAPLLQYLSILIQNMDSEHSIYYCFSNDYINNIISHPYIFDGGDLAPYYVSFLRAVSGKVNRDTLCLLVKVHGDAVVSFPLYTEALRFAHHEERMIKTAIRALTLNIYNVSDGMVFQFITTPPVSKYFSDLVCRLRDICFHLDACLHSRGREMDMQKGRNSLIAESDKVADDLYYLKDILSVGEPCLSRLVTENLLDMLVFPIIVSLLAPKENNDSDLSAITSLYILSLLLQVVGGRCIINNVAGVILYPFLTLNERHLNEGNASLEHSGVYPFSKHVNEAKRVMCCAPEYKGAEGNDRNYDDARIADFMSSFNVSGSSGDIYLKRDGILAYIFSDHYVMLLASLFLFLILSESKDLDCAVAPVIGLYKLQTNDASTSKSADVGIFVKFMPEILNALLKVFAFQQSLSAMTLWQTGWCFLKLLSVHREGLHGDNLHLFNTSCKHSREGFLKELDGIWFDHIPNALRSQWASCKRVLEESSQHKDPLFLLELSLHQQSINGETSSYFAWQGMIDAVKVYILHFQLKSFISKGVLVENPLLLGSPTTNDSGAIHASDVSNASFGSDVSLESGTPCRIAFSNSELRDIYLIPVSSGMAGKLLLAEKHPFRSHRGVVIAIAPLAGLRPKIDEEHPSWLRLRIREFDAEFYSNEGNGKHLNPSDHVTDGRWTLGFPNRKACESAKLTIMSEITKQRSAVEYILAPMLQYDLGLAVTES 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1620 797 Pfam Uncharacterised conserved protein 43 192 IPR019155 -
Lele13g1620 797 PANTHER UNCHARACTERIZED 1 786 IPR039272 -
Lele13g1620 797 Pfam CLEC16A C-terminal 253 336 IPR045820 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1620 Lele-ChrLele13 25129898 25137053 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1620 13 25129898 25137053 Lele05g1032 05 6413332 6418950 CCT
Lele13g1620 13 25129898 25137053 Lele06g0894 06 5558286 5561029 CCT
Lele13g1620 13 25129898 25137053 Lele07g1071 07 6464275 6471044 CCT
Lele13g1620 13 25129898 25137053 Lele08g0883 08 5575983 5578894 CCT
Lele13g1620 13 25129898 25137053 Lele15g0795 15 4577425 4584614 hybridization
Lele13g1620 13 25129898 25137053 Lele16g0809 16 4541700 4546019 hybridization