Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1141 ATGTCGAGCTTCCAATTGGGTGTTATTGGTGCCCTGTTTCTCTCTGTTGCCTCCTCTGTTTCCATTGTCATCTGCAACAAAGCTCTCATGAGCAATCTCGGATTCCCTTTTGCCACAACACTTACTAGTTGGCATCTGATGGTCACATTTTGTACCCTTCATGTGGCTCAGCGTCTCAACTTCTTCGAGAACAAGCCCATTGATATGAAGACCGTTATGCTTTTTGGCATACTAAATGGTGTTTCCATTGGCTTTCTTAACTTGAGCCTCGGTTTCAATTCCATTGGCTTCTATCAGATGACAAAGCTTGCAATTATCCCATTTACCGTACTGCTAGAAACTGTTTTCCTCAAGAAGCAGTTCAGCCAGAAAATAAAGCTCTCTCTTTTCCTCTTACTGGTTGGAGTTGGCATCGCTTCCATTACTGACCTTCAACTCAATTTTGTTGGAACCGTTCTCTCCCTTCTAGCTATCATCACCACTTGTGTTAGCCAAATTCTTACCAACACAATACAGAAGAAGCTTAATGTGTCTTCCACCCAGCTTCTCTATCAATCAGCTCCATTCCAAGCAGCAATTCTTTTCGTTTCAGGCCCTCTTGTAGATCAGATGCTCACCAAACAGAACGTCTTCTCCTACAAATACTCTCCTATAGTCTTGGCATTCGTCATCTTGTCTTGCTTGATAGCTGTTTCTGTCAACTTCAGCACATTTCTAGTGATTGGGAAAACATCACCTGTAACTTATCAAGTTCTAGGCCATCTCAAAACCTGCCTTGTTCTTGCATTTGGCTACACATTGCTTCATGATCCCTTCACTGAGAAGAACATTATTGGAATCCTCGTTGCCATCTTTGGAATGGGCTTGTATTCTTATTTCTGCACGCAGGAGAACAAGAAGAAACAGTCAGGCGATCTCTCCATAGCATATCAGGTTAAAGACAGAGATCATAGTGCACCGCTTTTGGCTGGAAAAAACACGGGTCATCAAGATAAGGAGAGTCCTGAGCTTAAGAAACCAAGCAAGGATTCTCTTGTTTAG 1041 0.4265 MSSFQLGVIGALFLSVASSVSIVICNKALMSNLGFPFATTLTSWHLMVTFCTLHVAQRLNFFENKPIDMKTVMLFGILNGVSIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETVFLKKQFSQKIKLSLFLLLVGVGIASITDLQLNFVGTVLSLLAIITTCVSQILTNTIQKKLNVSSTQLLYQSAPFQAAILFVSGPLVDQMLTKQNVFSYKYSPIVLAFVILSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTEKNIIGILVAIFGMGLYSYFCTQENKKKQSGDLSIAYQVKDRDHSAPLLAGKNTGHQDKESPELKKPSKDSLV 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1141 346 MobiDBLite consensus disorder prediction 329 346 - -
Lele10g1141 346 MobiDBLite consensus disorder prediction 319 346 - -
Lele10g1141 346 PANTHER SOLUTE CARRIER FAMILY 35 9 294 - -
Lele10g1141 346 Pfam Triose-phosphate Transporter family 18 291 IPR004853 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1141 Lele-ChrLele10 22727834 22729822 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele10g1141 19 343 Organic Solute Cotransporters AT4G32390 25.664 3.41e-19 85.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1141 10 22727834 22729822 Lele29g0242 29 1393298 1397866 CCT
Lele10g1141 10 22727834 22729822 Lele30g1165 30 14585469 14590225 CCT
Lele10g1141 10 22727834 22729822 Lele31g1307 31 19157811 19169750 CCT
Lele10g1141 10 22727834 22729822 Lele32g0230 32 1368871 1373798 CCT
Lele10g1141 10 22727834 22729822 Lele11g1167 11 18933640 18935109 hybridization
Lele10g1141 10 22727834 22729822 Lele12g0155 12 1180703 1182680 hybridization