Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1167 ATGAAGACCGTTACTCTTTTTGGCTTTCTAAATGGCGTCTCCATAGGATTTCTTAACTTGAGCCTCGGTTTCAATTCCATTGGCTTCTATCAGATGACAAAGCTTGCAATCATACCATTCACCGTACTGCTAGAAACTTTTTTCCTCAAGAAGCAGTTCAGCCAGAAAATAAAGCTCTCTCTTTTCCTCTTACTGATTGGAGTTGGCATTGCTTCCATCACGGACCTTCAACTCAATTTACTTGGAACCGTTCTTTCCCTTCTAGCTATCGTCACCACCTGTGTTAGCCAAATTCTTACCAACACAATACAGAAGAAGCTTAATGTGTCTTCCACCCAGCTTCTCTATCAATCTGCTCCATTCCAAGCAGCAATTCTTCTCGTTTCAGGGCCTTTGGTAGATCAGATGCTCACCAAACAGAACGTCTTCTCCTACAAATACTCTCCTATAGTCTTGGCATTCATCATCTTGTCCTGTTTGATAGCTGTTTCTGTCAACTTCAGCACATTTCTAGTGATTGGGAAAACATCTCCGGTAACTTATCAAGTCCTAGGCCATCTCAAGACCTGCCTTGTTCTTGCGTTTGGCTACACATTGCTCCATGATCCATTCACTGAGAGGAACATTATTGGAATCCTCGTTGCCATCTTCGGAATGGGCCTGTATTCCTATTTCTGCACTCAGGAGAACAAGAAGAAACAGTCAGGCGATCTCTCAATAGCATCTCAGGTTAAAGACAAAGATCATAGCGCGCCTCTTTTGGCTGGAAAGAACACTGGCCATCAAGATAAGGAAAGTACTGAGCTTAAGAAACCTAGCAAGGATTCTCTTGTTTAG 837 0.4277 MKTVTLFGFLNGVSIGFLNLSLGFNSIGFYQMTKLAIIPFTVLLETFFLKKQFSQKIKLSLFLLLIGVGIASITDLQLNLLGTVLSLLAIVTTCVSQILTNTIQKKLNVSSTQLLYQSAPFQAAILLVSGPLVDQMLTKQNVFSYKYSPIVLAFIILSCLIAVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGYTLLHDPFTERNIIGILVAIFGMGLYSYFCTQENKKKQSGDLSIASQVKDKDHSAPLLAGKNTGHQDKESTELKKPSKDSLV 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1167 278 Pfam Triose-phosphate Transporter family 18 223 IPR004853 -
Lele11g1167 278 PANTHER SOLUTE CARRIER FAMILY 35 2 226 - -
Lele11g1167 278 SUPERFAMILY Multidrug resistance efflux transporter EmrE 148 223 - -
Lele11g1167 278 MobiDBLite consensus disorder prediction 261 278 - -
Lele11g1167 278 MobiDBLite consensus disorder prediction 237 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1167 Lele-ChrLele11 18933640 18935109 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele11g1167 19 257 Organic Solute Cotransporters AT1G21870 26.141 1.08e-18 82.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1167 11 18933640 18935109 Lele29g0241 29 1390679 1391185 CCT
Lele11g1167 11 18933640 18935109 Lele30g1167 30 14592320 14592823 CCT
Lele11g1167 11 18933640 18935109 Lele31g1308 31 19172066 19172572 CCT
Lele11g1167 11 18933640 18935109 Lele32g0229 32 1366411 1367588 CCT
Lele10g1141 10 22727834 22729822 Lele11g1167 11 18933640 18935109 hybridization