Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele10g1053 ATGGCCGCCGTTGGGAACAACCCCCACCTACTTCCCAACCTCACCCGCTTCAAATGCACCAGAACGGGGACCAGGACAAGGTTAGACACGCACGGGCTCTGCGTAAGCTCGGTTCGGTGCTCCTATGGAGTTTTGAGTGAGAATCGCGAAGTCACATTGAATAATAAGAACGATTTCTTAGAAATCTGCCGAGTTGTGAATAGCATTTGGCAAACCAGCGGTGGCTGGGGCCGAATCGACAGAGACGCCGCCGTCGAAGCGATGCTACGATATGCCGACGCTGGCTTATCCACCTTCGACATGGCCGACCACTGTACGTATAGTAAAAGTAGTGACACTGCAGAAGAAACTTGTAGACACTCGTGTTTGGAAATGGCAATGTTATTGCGTCAACCGTTGAGCAAATTCACTTTGGATCGCAATGATATAATAACTAGGAGGGGTATTACAGCACGAAAATGTAAGAATCTGAGGCCATTTCAATGTGTGCAAACAGCGGATAGCTGGCGCATTGTCGTCAAGAATGGGAACGATTCATTGGAAATTTGCCGGGTTGTGAATGGGATGTGGCAAACGAGTGGTGGGTGGGGAAGAATTGATAGAGATAATGCTGTTGATGATATGCTTAAATATGCAGATGCTGGGCTCACCACTTTTGATATGGCTGATGTATATGGACCTGCTGAAGACCTATATGGCATTTTCATCACTCTAGTTCGTCGTGAGCGCCCACCTGAATTCTTGGAAAAGGTCAGAGGTCTCACCAAGTGGGTGCCACCGCCTGTTAGGATGGCCAGTAGCTTTGTAAGAGATAGCATTGATGTTTCACGAAGAAGAATGGATGTCGCTTCCTTGGACATGCTTCAGTTTCATTGGGGGGATTGCTCGAATCCTGGTTACCTAGATGCACTAAAACACCTCACAGATTTAAAAGAAGAAGGTAAAATCAAGACTGTTTCCTTGACTAATTTCGATACTGAGAGACCGCAAATAATTCTTGAAAACGAGATTCCGGTTGTAAGCAATCAGGTAAATCCACGTGCTCTAGTTTTTGCTTGCCAAATATTTGTTATTAGCATTACTGATGTTTTCTTCCCAGTTGCTGAGTATTATTGGAACTTTTCTATCGTCAGGTATGGGACTGTAATGGGTGGTCTATTGTCTGAGAAGTTCCTTGACACAAACATAACTTTTCCTTTTGCCGGTCCTGCATTAAACACTCCCTCCCTCCAGAAGTACAAAAGTATGGTAGATGCTTGGGGAGGATGGAGTTTGTTCCAGGGCGTACTTCGGACACTTAAACAAGTGGCATCGAAGCATGGGGTTTCGATTTCAACTGTTTCTGTCAAGTACATACTTGATCAGCCCACTGTAGCAGGATCAATGATCAGTGTCAGACTCGGCCTGTCTGAACATATTCAAGACACGAATGCCATATTTTCTCTCGTTCTTGACGCGGAGGACGTCAACAGCATAAAAGAAGCCTCAGGGAAAGGAAAATATCTGCTTAAAGCGATTGGTGATTGTGGAGATGAATACGGGCGTGCATGA 1551 0.4558 MAAVGNNPHLLPNLTRFKCTRTGTRTRLDTHGLCVSSVRCSYGVLSENREVTLNNKNDFLEICRVVNSIWQTSGGWGRIDRDAAVEAMLRYADAGLSTFDMADHCTYSKSSDTAEETCRHSCLEMAMLLRQPLSKFTLDRNDIITRRGITARKCKNLRPFQCVQTADSWRIVVKNGNDSLEICRVVNGMWQTSGGWGRIDRDNAVDDMLKYADAGLTTFDMADVYGPAEDLYGIFITLVRRERPPEFLEKVRGLTKWVPPPVRMASSFVRDSIDVSRRRMDVASLDMLQFHWGDCSNPGYLDALKHLTDLKEEGKIKTVSLTNFDTERPQIILENEIPVVSNQVNPRALVFACQIFVISITDVFFPVAEYYWNFSIVRYGTVMGGLLSEKFLDTNITFPFAGPALNTPSLQKYKSMVDAWGGWSLFQGVLRTLKQVASKHGVSISTVSVKYILDQPTVAGSMISVRLGLSEHIQDTNAIFSLVLDAEDVNSIKEASGKGKYLLKAIGDCGDEYGRA 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele10g1053 516 CDD AKR_unchar 181 495 - -
Lele10g1053 516 PANTHER PROTEIN TAS 38 105 - -
Lele10g1053 516 Pfam Aldo/keto reductase family 185 495 IPR023210 -
Lele10g1053 516 Gene3D - 172 496 IPR036812 -
Lele10g1053 516 SUPERFAMILY NAD(P)-linked oxidoreductase 173 499 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele10g1053 Lele-ChrLele10 21838894 21842146 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele10g1053 10 21838894 21842146 Lele29g0334 29 2029896 2030325 CCT
Lele10g1053 10 21838894 21842146 Lele30g1069 30 13923289 13926606 CCT
Lele10g1053 10 21838894 21842146 Lele31g1207 31 18455274 18455703 CCT
Lele10g1053 10 21838894 21842146 Lele32g0322 32 2001631 2002084 CCT
Lele10g1053 10 21838894 21842146 Lele11g1085 11 18135619 18138865 hybridization
Lele10g1053 10 21838894 21842146 Lele12g0231 12 2000481 2013552 hybridization