Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele11g1085 ATGGCCGCCGTAGTGAACCACCCGCACCTAATTCCCAACCTTACCCAATTCAAGTGCACCAGAACGGGGTCCAGGACAAGGTTCGACACGCGTGGGCTCTGCTTGAGCTCGGTTCGGTGCTCCTATGGAGTTTTGAGTGAGAACCGCGAAGTCACATTGAGTAATAAGAACGATTCCTTAGAAATCTGCCGAGTTCTGAATGGCATGTGGCAAACCAGCGGTGGCTGGGGCCGAATCGACCGGGACGCCGCCGTCGAAGCGATGCTCCGATATGCCGACGCGGGCTTATCCACCTTCGACATGGCCGACCACTTGTTATTGCGTAATCCGTTGAGCAAATTCACTTTCAATGGCAATGATACAGTAACTAGGAGGGGTATTACCGCCAGAAAATGTACGAATCTGAGGCCATTTCAATGTGTGCAAACAGAGGATAGTCGGTGCATTGTCGTCAAGAATGGGAACGATTCATTGGAAATTTGTCGGGTTGTGAATGGGATGTGGCAAACGAGTGGTGGGTGGGGAAGAATTGATAGAGATAATGCTGTTGATGATATGCTTAAATATGCTGATGCTGGGCTCACCACTTTTGATATGGCTGATATATATGGACCTGCTGAAGACCTATATGGCATTTTCATCAATCGAGTTCGTCGTGAGCGCCCACCGGAATTCGTGGAAAAGGTCAGAGGTCTCACGAAATGGGTGCCACCGCCCGTTAAGATGACCAGTAGCTTTGTAAGAGACAGCATTGATGTTTCACGAAGAAGAATGGATGTCGCTTCCTTGGACATGCTTCAGTTTCATTGGTGGGATTACTCGAATCCTGGTTACCTAGATGCACTAAAACACCTCACAGATTTAAAAGAAGAAGGTAAAATCAAGACTGTTGCCTTGACGAACTTCGATACCGAGAGACTGCAAATAATTCTTGAAAATGAGATTCCGGTTGTAAGCAATCAGGTGCAACATTCAATTGTTGACATGCGTCCCCAACAGAAAATGGCAGAGCTTTGTCAGCTTACAGGAGTCAAACTTATAACTTATGGGACTGTAATGGGTGGCCTATTGTCTGAGAAGTTCCTTGACACCAACATAACTATTCCTTTTGCCGGTCCTGCATTAAACACCCCCTCCCTCCAGAAGTACAAAAGAATGGTAGATGCTTGGGGAGGATGGAGTTTGTTCCAGGGCCTACTTCGGACGCTTAAACAAGTGGCTTCGAAGCATGGGGTTTCGATTTCAACTGTTGCTGTCAAGTACATAATTGATCAGCCTGCTGTAGCAGGATCAATGATTGGTGTCAGACTTGGCCTGTCTGAACATATTCAAGACACGAATGCCATATTTTCGCTTGTTCTTGATGAGGAGGACGTCAACAACATAAAAGAAGCCTCAGGGAAAGGAAAAGATCTTCTTCAAGTGATTGGAGATTGTGGAGATGAATACAGGCGTGCATGA 1461 0.4668 MAAVVNHPHLIPNLTQFKCTRTGSRTRFDTRGLCLSSVRCSYGVLSENREVTLSNKNDSLEICRVLNGMWQTSGGWGRIDRDAAVEAMLRYADAGLSTFDMADHLLLRNPLSKFTFNGNDTVTRRGITARKCTNLRPFQCVQTEDSRCIVVKNGNDSLEICRVVNGMWQTSGGWGRIDRDNAVDDMLKYADAGLTTFDMADIYGPAEDLYGIFINRVRRERPPEFVEKVRGLTKWVPPPVKMTSSFVRDSIDVSRRRMDVASLDMLQFHWWDYSNPGYLDALKHLTDLKEEGKIKTVALTNFDTERLQIILENEIPVVSNQVQHSIVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNITIPFAGPALNTPSLQKYKRMVDAWGGWSLFQGLLRTLKQVASKHGVSISTVAVKYIIDQPAVAGSMIGVRLGLSEHIQDTNAIFSLVLDEEDVNNIKEASGKGKDLLQVIGDCGDEYRRA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele11g1085 486 Gene3D - 150 474 IPR036812 -
Lele11g1085 486 SUPERFAMILY NAD(P)-linked oxidoreductase 57 104 IPR036812 -
Lele11g1085 486 Pfam Aldo/keto reductase family 163 465 IPR023210 -
Lele11g1085 486 CDD AKR_unchar 159 465 - -
Lele11g1085 486 PANTHER PROTEIN TAS 38 104 - -
Lele11g1085 486 SUPERFAMILY NAD(P)-linked oxidoreductase 152 465 IPR036812 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele11g1085 Lele-ChrLele11 18135619 18138865 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g1085 11 18135619 18138865 Lele29g0333 29 2028402 2029726 CCT
Lele11g1085 11 18135619 18138865 Lele30g1070 30 13927235 13927822 CCT
Lele11g1085 11 18135619 18138865 Lele31g1208 31 18455986 18457208 CCT
Lele11g1085 11 18135619 18138865 Lele32g0321 32 2000043 2001452 CCT
Lele09g1086 09 20050159 20053424 Lele11g1085 11 18135619 18138865 hybridization
Lele10g1053 10 21838894 21842146 Lele11g1085 11 18135619 18138865 hybridization