Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0334 ATGGGAGAGTTCAACCACTTTGTGATTGCTAAGTTCAAGGAAGGTGTCGCCGTTGAAGATCTCATCAAAGGCATGGAGAAGATGGTCTCTCAGATTGATTCTGTCAAACACTTTGAATGGGGACAGGACACAGAGAGCCCAGAGATGTTAAGACAGGGTTACACGCATGCCTTCTTGATGACATTCAACAGTAAGGAAGATTTTCTTGCATTTCAAGGTCACCCAAATCATGTGGAATTCTCTGCAACATTTTCTACTGCTATTGAGAAGCTTGTTCTTCTGGATTTCCCAACCACTCTTGTTAAGCCACCACCAGCAACTACCACAGCATGA 333 0.4384 MGEFNHFVIAKFKEGVAVEDLIKGMEKMVSQIDSVKHFEWGQDTESPEMLRQGYTHAFLMTFNSKEDFLAFQGHPNHVEFSATFSTAIEKLVLLDFPTTLVKPPPATTTA 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0334 110 SUPERFAMILY Dimeric alpha+beta barrel 3 100 IPR011008 -
Lele29g0334 110 PANTHER - 3 99 IPR044662 -
Lele29g0334 110 Gene3D - 2 109 - -
Lele29g0334 110 ProSiteProfiles Stress-response A/B barrel domain profile. 4 96 IPR013097 -
Lele29g0334 110 SMART Dabb_2 4 98 IPR013097 -
Lele29g0334 110 Pfam Stress responsive A/B Barrel Domain 5 96 IPR013097 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0334 Lele-ChrLele29 2029896 2030325 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1086 09 20050159 20053424 Lele29g0334 29 2029896 2030325 CCT
Lele10g1053 10 21838894 21842146 Lele29g0334 29 2029896 2030325 CCT
Lele29g0334 29 2029896 2030325 Lele31g1207 31 18455274 18455703 hybridization
Lele29g0334 29 2029896 2030325 Lele32g0322 32 2001631 2002084 hybridization