Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g1086 ATGGCCGCCGTAGTGAACCACCCGCACCTACTTCCCAACCTTACCCGCTTCAAGTGCACCAGAACGGGGTCCAGGACAAGGTTCGACACGCGTGGGCTCTGCTTGAGCTCGGTTCGGTGCTCCTATGGAGTTTTGAGTGAGAACCGCGAAGTCACATTGAGTAATAAGAACGATTCCTTAGAAATCTGCCGAGTTCTGAATGGCATGTGGCAAACCAGCGGTGGCTGGGGCCGAATTGAGCGGGACGCCGCCGTCGAAGATATGCTCCGATATGCCGACGCCGGCTTATCCACCTTCGACATGGCCGACCACTTGTTATTGCGTAATCCGTTGAGCAAATTCACTTTCAATGGCAATGATACAGTAACTAGGAGGGGTATTACAGCAAGAAAATGTAAGAATCTGAGGCCATTTCAATGTGTGCAAACAGAGGATAGCCGGTGCATTGTCGTCATGAATGGGAACGATTCATTGGAAATTTGCCGGGTTGTGAATGGGATGTGGCAAACGAGTGGTGGGTGGGGAAAAATTGATAGAGATAATGCTGTTGATGATATGCTTAAATATGCTGATGCTGGGCTCACCACTTTTGATATGGCTGATATATATGGACCAGCTGAAGACCTATATGGCATTTTCATCAATCGAGTTCGTCGTGAGCGCCCACCAGAATTCGTGGAAAAGGTCAGAGGTCTTACCAAGTGGGTGCCACCGCCTGTTAAGATGACCAGTAGCTTTGTAAGAGACAGCATTGATGTTTCACGAAGAAGAATGGATGTCGCTTCCTTGGACATGCTTCAGTTTCATTGGTGGGATTACTCGAATCCTGGTTACCTAGATGCACTAAAACACCTCACAGATTTAAAAGAAGAAGGTAAAATCAAGACTGTTGCCTTGACGAACTTCGATACTGAGAGACTGCAAATAATTCTTGAAAATGAGATTCCGGTAGTAAGCAATCAGGTGCAACATTCAATTGTTGACATGCGTCCCCAACAGAAAATGGCAGAGCTTTGTCAGCTTACAGGAGTCAAACTTATAACTTATGGGACTGTAATGGGTGGCCTATTGTCTGAGAAGTTCCTTGACACCAACATAACTATACCTTTTGCCGGTCCTGCAATAAACACACCCTCCCTCCAGAAGTACAAAAGAATGGTAGATGCTTGGGGAGGATGGGGTTTGTTCCAGGGCCTACTTCGGACGCTTAAACAAGTGGCTTCGAAGCATGGGGTTTCGATTTCAACTGTTGCTGTCAAGTACATACTTGATCAGCCTTCTGTAGCAGGATCAATGATTGGTGTCAGACTTGGCCTGTCTGAACATATTCAAGACACGAATGCCATATTTTCGCTTGTTCTTGATGAGGAGGACGTCAACAGCATAAAAGAAGCCTCAGGGAAAGGAAAAGATCTGCTTCAAGTGATTGGTGATTGTGGAGATGAATACAGGCGTGCATGA 1461 0.4648 MAAVVNHPHLLPNLTRFKCTRTGSRTRFDTRGLCLSSVRCSYGVLSENREVTLSNKNDSLEICRVLNGMWQTSGGWGRIERDAAVEDMLRYADAGLSTFDMADHLLLRNPLSKFTFNGNDTVTRRGITARKCKNLRPFQCVQTEDSRCIVVMNGNDSLEICRVVNGMWQTSGGWGKIDRDNAVDDMLKYADAGLTTFDMADIYGPAEDLYGIFINRVRRERPPEFVEKVRGLTKWVPPPVKMTSSFVRDSIDVSRRRMDVASLDMLQFHWWDYSNPGYLDALKHLTDLKEEGKIKTVALTNFDTERLQIILENEIPVVSNQVQHSIVDMRPQQKMAELCQLTGVKLITYGTVMGGLLSEKFLDTNITIPFAGPAINTPSLQKYKRMVDAWGGWGLFQGLLRTLKQVASKHGVSISTVAVKYILDQPSVAGSMIGVRLGLSEHIQDTNAIFSLVLDEEDVNSIKEASGKGKDLLQVIGDCGDEYRRA 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g1086 486 Pfam Aldo/keto reductase family 163 465 IPR023210 -
Lele09g1086 486 SUPERFAMILY NAD(P)-linked oxidoreductase 152 465 IPR036812 -
Lele09g1086 486 CDD AKR_unchar 159 465 - -
Lele09g1086 486 Gene3D - 151 466 IPR036812 -
Lele09g1086 486 PANTHER PROTEIN TAS 38 104 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g1086 Lele-ChrLele09 20050159 20053424 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g1086 09 20050159 20053424 Lele29g0334 29 2029896 2030325 CCT
Lele09g1086 09 20050159 20053424 Lele30g1069 30 13923289 13926606 CCT
Lele09g1086 09 20050159 20053424 Lele31g1207 31 18455274 18455703 CCT
Lele09g1086 09 20050159 20053424 Lele32g0322 32 2001631 2002084 CCT
Lele09g1086 09 20050159 20053424 Lele11g1085 11 18135619 18138865 hybridization
Lele09g1086 09 20050159 20053424 Lele12g0231 12 2000481 2013552 hybridization