Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1423 ATGCAACACTATCACCCTCAATCCCATATCGCCGCCACCCCTGATGGGGCCGGCACCGCTATTTCTGATGTTAAACGCGGCAAAAAGCGAGGTAGTTATAACTGTGGACGCTGCGGTCTTCCTAAGAAGGGCCATGCTTGCCATCTCAGAACTCCCACATCTGCTCCTGCTACTACTCCTACTGATGTATCGGTGTCGAGTTTTTCTGCGATTTCCGGCCCTTCATCTGTCAGCGTAGTTCGTCAGCCGCCGCCCCGGCAGCCTTACTCTCGCCTCCGTCGTGCGTTATCATTCGATGACGTCGATGACCAAACCAGCGTATTCGATCATTCGGAGTTGTCTGACGAAGAGGGTCGGGATCTATTTATTGACCCAGAGCCGGATCTAGATTCGTCTGGGTTGCCGGCAAGCCTTTTGTGGGAAGTGCTGAGGAGGCTGCCGCCGACGGGATTGTTGTCAGCGGCTAGGGTATGCAAGGGATGGAGGGATATGACGAGGAGGCTGTGGAGGGCAGCGGAGGAGCTTAAACTCAGGGTTCCAGCTGGCGTCCAGCTTGGATTTGTTGCGCTGATGCTGCAGAAGTGTCCGGGAGTTGTGAAGCTCTCTCTTAAAATGGAAAGCGATTTGGATTCAACCATGCTGGCCTGCATTGCATTCTCATGCCCTAATCTGGAGTCTATGGAGATATCGACATCTAATACTGCAATCAATCGGATCAATGGGGATGAATTATACCGATTTGTTGCCGATAAACGAAACCTGAAATGCCTCAAGATGGAAGGTTGTCATAATCTGGGGGGTTTTGTTCTGTGTTCTTCTAGTCTTTCAACACTTTGGTTATCGGATCTCCATTCTCTTTCTAAGATGGTATTTAACTGTCCCCAGCTGAGAGAGATATCATTGGAATTTTCTCAACAAGAAAATGAAGCTACTGATATCATTGGTATGATTGAAAATTTGGGACGAACTTGCCCCAGATTGCAAAACATACATGTCTCTTCAATGCGGCTTTCTCATGCTGCTGTACTTGCTCTAACGGCTGCTCAGTTGAGAGGGCTGCGAATGCTTTCTTTAGTTCTTGGATTTGAAGTTACTGACGCATCTGTTGCTGCAATTGCTTCCACCTATCCAAATCTAGAATTGCTTGATCTCAGTGGATCTAGCATCAGTGACAGTGGAATTGGGATAATCTGTAATGCATTCCCAGAAACTTTGTCAAGACTTCTCCTCGCTCTTTGCCCCAACGTGACGTCAAGTGGCATTCAATTTGCTTCAGCTCAATTGCCGCTTCTTGAACTTATGGACTGTGGCATGACCATATGTGACCCTAATTCTGAAAATCAAACTGCTGATGAAAACAACTGCAAATCAACAACCAATTCTAATCTTCACCTTGTGAATCAGAAGTTAATTATCAAACACAATCGATTGAAGAAACTAAGTTTATGGGGCTGTTCTGGCTTAGATGCTCTATATTTAAACTGTCCACAGCTCAATGATCTGAATCTAAATTCTTGTAAAAATTTGCATCCAGAGAGATTGTTGCTTCAGTGCCCCGGTTTAGAAAATGTACATGCATCGGGTTGTCAGGACATGCTAATTCGGGCTATTCAAAGTCAGGTCTGCAATGCATTTACCGCTATGGAAAACCTATCACCTTGTAAACGTCTACCTGATGGCTCCAAAAGGGTCAGGGTTCCACATTTTCTCAGCAGTGAGTTGCCTGGTGATGGGAAAAAGCGGAGGAGGGCTGAGAATAGGCTCTGCAACTGGACTATCCAGACTAGCCGATCAACCCAGGAACCGATTGCTAGTTTTGAAGTTATCAGGCATGTGATTTCAGTTCTTGATCTGCGAAACCCTGTTCCTTGCTGTGCTCATCTGTAG 1887 0.4642 MQHYHPQSHIAATPDGAGTAISDVKRGKKRGSYNCGRCGLPKKGHACHLRTPTSAPATTPTDVSVSSFSAISGPSSVSVVRQPPPRQPYSRLRRALSFDDVDDQTSVFDHSELSDEEGRDLFIDPEPDLDSSGLPASLLWEVLRRLPPTGLLSAARVCKGWRDMTRRLWRAAEELKLRVPAGVQLGFVALMLQKCPGVVKLSLKMESDLDSTMLACIAFSCPNLESMEISTSNTAINRINGDELYRFVADKRNLKCLKMEGCHNLGGFVLCSSSLSTLWLSDLHSLSKMVFNCPQLREISLEFSQQENEATDIIGMIENLGRTCPRLQNIHVSSMRLSHAAVLALTAAQLRGLRMLSLVLGFEVTDASVAAIASTYPNLELLDLSGSSISDSGIGIICNAFPETLSRLLLALCPNVTSSGIQFASAQLPLLELMDCGMTICDPNSENQTADENNCKSTTNSNLHLVNQKLIIKHNRLKKLSLWGCSGLDALYLNCPQLNDLNLNSCKNLHPERLLLQCPGLENVHASGCQDMLIRAIQSQVCNAFTAMENLSPCKRLPDGSKRVRVPHFLSSELPGDGKKRRRAENRLCNWTIQTSRSTQEPIASFEVIRHVISVLDLRNPVPCCAHL 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1423 628 SUPERFAMILY F-box domain 132 172 IPR036047 GO:0005515
Lele05g1423 628 Gene3D Ribonuclease Inhibitor 450 572 IPR032675 -
Lele05g1423 628 Gene3D Ribonuclease Inhibitor 124 311 IPR032675 -
Lele05g1423 628 Gene3D Ribonuclease Inhibitor 312 445 IPR032675 -
Lele05g1423 628 SUPERFAMILY RNI-like 190 419 - -
Lele05g1423 628 ProSiteProfiles F-box domain profile. 128 172 IPR001810 GO:0005515
Lele05g1423 628 PANTHER MITOCHONDRIAL ATP SYNTHASE COUPLING FACTOR B 155 488 - -
Lele05g1423 628 MobiDBLite consensus disorder prediction 1 22 - -
Lele05g1423 628 Pfam F-box-like 134 170 IPR001810 GO:0005515
Lele05g1423 628 FunFam Uncharacterized protein 127 312 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1423 Lele-ChrLele05 9039267 9044188 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1423 05 9039267 9044188 Lele07g1487 07 9073186 9077512 hybridization
Lele05g1423 05 9039267 9044188 Lele08g1281 08 8149149 8153356 hybridization