Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0385 ATGTGTGCGTGTTGCGATGGTGAAGGATTCGGAAGGATTGGCCGTTTAGTTGCCAGGGTGGCTCTGATGAGAGATGATATTGAGCTCGTTGCTGTTAACGATCCATTCATCTCCACGGATTACATGAACTGGAAAGGAAAGGCTACATTACATCCAAATGTGTTAATCATTTTGAATTGTGCGCCACAGACTTACATGTTCAAGTACGACAGTGTCCATGGGCAGTGGAAGCACCATGCCATTAAGGTCAAGGACTCCAAAACCCTTCTCTTCGGTGAAAAGAGTGTCGCCGTTTTCGGTGTAAGGAACCCAGAGGAAATTCCATGGGGTGAGGTCGGAGCTGACTTTGTTGTTGAGTCTACTGGGGTTTTCACTGACAAAGACAAGGCTGCTGCTCACTTGAAGGTCATTCACGATAAATTTGGTATCGTTGAAGGTCTCATGACCACAGTCCACTCTATTACCGCCACTCAAAAGACTGTTGATGGACCATCATCGAAGGACTGGAGAGGTGGTAGAGCTGCTTCCTTTAACATCATTCCTAGCAGTACTGGTGCTGCTAAGGCTGTTGGCAAGGTGTTGCCTTCGCTGAATGGAAAGTTGACAGGAATGGCTTTCCGTGTTCCTACTGTTGATGTTTCAGTGGTTGATCTAACTGTTAGAATTGAGAAGGCAGCCAGTTATGATGACATTAAAGCTGCAGTCAAGGAGGCATCTGAGGGAAGCATGAAGGGAATTCTTGGTTACACTGAGGATGATGTGGTGTCCACTGATTTTGTTGGTGACTTCAGGTCAAGCATTTTTGATGCTAAGGCTGGAATTTCCTTAAGTAACAATTTTGTGAAGCTTGTCACGTGGTATGACAATGAATGGGGCTACAGTGAGTTACTTGGGAAGACTATTGAAACACTTCCTTGTCAAGATCTCAAACGCTTTGTTGAGCTGGATAACCGTGCAAGAATCAAGGGGAATAACACTGTCATCAACAACAACATCTGA 999 0.4515 MCACCDGEGFGRIGRLVARVALMRDDIELVAVNDPFISTDYMNWKGKATLHPNVLIILNCAPQTYMFKYDSVHGQWKHHAIKVKDSKTLLFGEKSVAVFGVRNPEEIPWGEVGADFVVESTGVFTDKDKAAAHLKVIHDKFGIVEGLMTTVHSITATQKTVDGPSSKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRIEKAASYDDIKAAVKEASEGSMKGILGYTEDDVVSTDFVGDFRSSIFDAKAGISLSNNFVKLVTWYDNEWGYSELLGKTIETLPCQDLKRFVELDNRARIKGNNTVINNNI 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0385 332 Gene3D - 8 138 - -
Lele08g0385 332 Gene3D - 290 300 - -
Lele08g0385 332 SMART gp_dh_n_7 9 145 IPR020828 GO:0051287
Lele08g0385 332 FunFam Glyceraldehyde-3-phosphate dehydrogenase 127 289 - -
Lele08g0385 332 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 135 302 IPR020831 GO:0016620
Lele08g0385 332 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 203 220 IPR020831 GO:0016620
Lele08g0385 332 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 243 258 IPR020831 GO:0016620
Lele08g0385 332 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 146 162 IPR020831 GO:0016620
Lele08g0385 332 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 135 IPR036291 -
Lele08g0385 332 Gene3D Dihydrodipicolinate Reductase; domain 2 139 289 - -
Lele08g0385 332 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 61 127 IPR020828 GO:0051287
Lele08g0385 332 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 133 287 IPR020829 GO:0016620
Lele08g0385 332 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 131 287 - -
Lele08g0385 332 PIRSF GAPDH 131 303 IPR020831 GO:0016620
Lele08g0385 332 PIRSF GAPDH 8 136 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0385 Lele-ChrLele08 2364443 2368010 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0385 08 2364443 2368010 Lele08g0385 08 2364443 2368010 ECH
Lele07g0579 07 3330822 3331399 Lele08g0385 08 2364443 2368010 ECH
Lele05g0554 05 3259877 3261165 Lele08g0385 08 2364443 2368010 hybridization
Lele06g0379 06 2327229 2329490 Lele08g0385 08 2364443 2368010 hybridization