Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0554 ATGACCACGGTCCACTCTATTACTGCCACTCAAAAGACTGTTGATGGACCATCATCAAAGGACTGGGGAGGTGGTAGAGCTGCTTCCTTTAACATCAGTCCTAGCAGCACTGTTGCTGCTAAGGCTGTTGGCAAGGGAATTCTTGGTTACACTGAGGAAGATGTAGTGTCCACTGATTTTGTTAGTGACTTCAGGTCAAGCATTTTTTATGCAAAGGCTGGAATTTCCTTAAGTAACAATTTTGTGAAGCTTGTCACGTGGTATGACAATGAATGGGGCTACAGATCATCTTCAATACTTGCTGTCTCTCTGTCATTTTCAATGTTGTTCGTTTCTGATGCATTTCTCGTGTGGTTGACCTGA 363 0.4325 MTTVHSITATQKTVDGPSSKDWGGGRAASFNISPSSTVAAKAVGKGILGYTEEDVVSTDFVSDFRSSIFYAKAGISLSNNFVKLVTWYDNEWGYRSSSILAVSLSFSMLFVSDAFLVWLT 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0554 120 Gene3D Dihydrodipicolinate Reductase; domain 2 46 90 - -
Lele05g0554 120 Gene3D Dihydrodipicolinate Reductase; domain 2 1 45 - -
Lele05g0554 120 MobiDBLite consensus disorder prediction 1 17 - -
Lele05g0554 120 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1 88 - -
Lele05g0554 120 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 1 45 IPR020829 GO:0016620
Lele05g0554 120 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 45 98 IPR020831 GO:0016620
Lele05g0554 120 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0554 Lele-ChrLele05 3259877 3261165 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0554 05 3259877 3261165 Lele05g0554 05 3259877 3261165 ECH
Lele05g0554 05 3259877 3261165 Lele06g0379 06 2327229 2329490 ECH
Lele05g0554 05 3259877 3261165 Lele07g0579 07 3330822 3331399 hybridization
Lele05g0554 05 3259877 3261165 Lele08g0385 08 2364443 2368010 hybridization