Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0579 ATGACCACGGTCCATTCTATTACTGATAAGTTTGTTGACTGGAGAGGTGGTAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGTTGCTGCTAAGGCTGTTGGCAAGGTGCTGCCTTCGCTGAATGGAAAGTTGACAGGAATGGCTTTCCGTATTCCTACTGTTGATGTTTCAGTGGCTGACCTAACTACTAGAATCGAGAAGGCAGCCAGTTATGATGACATTAAAGCTGCAGTCAACTGA 246 0.4512 MTTVHSITDKFVDWRGGRAASFNIIPSSTVAAKAVGKVLPSLNGKLTGMAFRIPTVDVSVADLTTRIEKAASYDDIKAAVN 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0579 81 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 1 80 IPR020829 GO:0016620
Lele07g0579 81 Gene3D Dihydrodipicolinate Reductase; domain 2 1 81 - -
Lele07g0579 81 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 1 80 - -
Lele07g0579 81 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 80 IPR020831 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0579 Lele-ChrLele07 3330822 3331399 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0579 07 3330822 3331399 Lele07g0579 07 3330822 3331399 ECH
Lele07g0579 07 3330822 3331399 Lele08g0385 08 2364443 2368010 ECH
Lele05g0554 05 3259877 3261165 Lele07g0579 07 3330822 3331399 hybridization
Lele06g0379 06 2327229 2329490 Lele07g0579 07 3330822 3331399 hybridization