Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0379 ATGGACCATCATCGAAGGACTGGAGAGGTGGTAGAGCTGCTTCCTTTAACATCATTCCTAGCAGTTGCTAAGGCTGTTGGCAAGGTGTTGCCTTCGCTGAATGGAAAGTTGACAGGAATGGCTTTTCGTGTTCCTACTGTTGATGTTTCAGTGGTTGACCTAACTGTTAGAATTGAGAAGGGAGCCAGTTATGATGACATTAAAGCTGCAGTCAAGGAGGCATCTGAGGGAAGCATGAAGGGAATTCTTTACACTGAGGATGATGTGGTGTCCACTGATTTTGTTGGTGACTTCAGGTCAAGCATTTTTGATGCAAAGGCTGGAATTTCCTTAAGTAACAATTTTGTGAAGCTTGTCACGTGGTATGACAATGAATGGGGCTACAGTGAGTTACTTGGGAAGAATATTGAAACGCTTCCTTGGCAAGATCTCAAACGCTTTGTTGAGCTGGATAACCGTGCAAGAATCAAGGAGAATAACTGTAATCAAGGACAACATCTGATTCAAAAGGACCTTTACGAAGGGGGAAAAATGTGCCAGTACTCTGTTCTTTGCCAATTATAA 564 0.4291 MDHHRRTGEVVELLPLTSFLAVAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRIEKGASYDDIKAAVKEASEGSMKGILYTEDDVVSTDFVGDFRSSIFDAKAGISLSNNFVKLVTWYDNEWGYSELLGKNIETLPWQDLKRFVELDNRARIKENNCNQGQHLIQKDLYEGGKMCQYSVLCQL 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0379 187 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 22 132 IPR020831 GO:0016620
Lele06g0379 187 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 39 56 IPR020831 GO:0016620
Lele06g0379 187 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 78 93 IPR020831 GO:0016620
Lele06g0379 187 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 22 122 - -
Lele06g0379 187 Gene3D Dihydrodipicolinate Reductase; domain 2 3 124 - -
Lele06g0379 187 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 22 122 IPR020829 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0379 Lele-ChrLele06 2327229 2329490 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0379 06 2327229 2329490 Lele06g0379 06 2327229 2329490 ECH
Lele05g0554 05 3259877 3261165 Lele06g0379 06 2327229 2329490 ECH
Lele06g0379 06 2327229 2329490 Lele07g0579 07 3330822 3331399 hybridization
Lele06g0379 06 2327229 2329490 Lele08g0385 08 2364443 2368010 hybridization