Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0159 ATGGAAGATTTGGGTGGTACCCGATTTGATGGCCTTGGCAATGCTGCAAGGAAGAAACGTAGTCAAACTTCTCGCCGGCCTCGGCCAGATTCACAGCCTGTTTCTGATGGTCCATCTCCCCTGTCATCAACACCTTCGGATGATGCAAGCAAGGCCTCTAGTGATGAGAATAGTGGTTGTGATAATAATCCTAAGAGAAAAGAATTTAATCTTAACCAGTATGTCTCCAGTGTAGCATCTGCTGCTGCAGCTGAAGATGATAAATCCCATATGAAGAGTAAAACGGATGGAGAATTCAATTTGTTTTTTAATAATGAGCCTGGACATGTTTTATATAACAAACGGTGCAGCGAGGGTGTCCTTGCTCCTGCTAACTGGAAAGGCTCCAGCAAATCGAAGGATAGCTTGGAATCAGAATCAAGAGGTGCAGATATGTATGGTATGAACTTGGGGCAGCCAGGAGCTTCTCAGGATAGCTTCGAGAATGATAACAGGGTCAAAAAGGTTAAACTAAAGGTTGGGGGTGTGATGCGTACGATCCAAGCTAACTCTGCTCCTAATGGTTCATCAAGCAGTGGGTCCACTGCAAAGAGCTCTCAGTTGTCAGATGCGTCCAGACCACGCCAAAAGCAACAGGGAAATTCAGATGATAACCAGTCCCCTTCAGATAAGAGGAGTGGCCTACAAGGCATACCGTGGAAAAATTTCTCTAGGGATGGGTTTGGTATTGGAAAGGTGGATTCTATGATAGGGAAGATATCAGGAAAGAACACATCCAGTAAGCAAGGCGAAAAGACTGAACCAATTCGTAAGAGCAAGCGAGTACCTAAGAGGCGTTTATTGGATGGGGAATTTGGTGATGACGATGACGACGATGACGAGATTCGCTATTTGGAAAAGCTCAAAACATCAAGAATTTCTGCAGTGTATAGAGATGAAGAAGAAGTAAGCAAGAAACATCGAAAATTATCTATTGTCGCTGATATGGAAACTTCTGCCTCATCAAGGTCAGTCAAAGATGGTAAAAACAAGTCCAGATCGGATAGAATGTATGAGGACACGGATTATGAGGATGATGAGGATTCTGTGTCTGATGTTGAGCCTGAGCACAACAAAAAGAGAAAGCAGAAGAAGGAATCTGTTGATGTATTGATGGATAGTAAGAGGGAAACAACTCTCACAACACGCCAAAGAGCTCTTCAATCAAGCAAAGATGCCTCTGCATCTGGTGCAAGTCTAATTGAGTTTCCTAATGGATTACCGCCTGCTCCACCTAGAAAGCAAAAAGAAAAGCTTTCGGAGGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCTATAAGAAAAATACTCGGTCAAGACTCCAGCAGGAAGAAACGGGAAGAGAAAATGAAGAAGCGCCAAGAAGAACTGGCACAGGAGAAGGCAGCCAATGCGCAGATGCTCGCATCAAACACCATCAGATATGTGATGGGTCCAGCTGGAACGGTTGTTACTTTTCCTGAGGAGATGGGCCTCCCTAGCATATTCAGCTCCGGGCCCCCCAGTTATCCACCGCCACGTGAGAAATGCGCGGGTCCATCTTGCACCAACCCATACAAGTATCGGGATTCGAGGTCCAAGCTTCCCCTTTGCAGTTTGCAGTGCTACAAAGCAGTCCAGGGGACGTTGACGGCTGAAACCATCTGTTGA 1743 0.4584 MEDLGGTRFDGLGNAARKKRSQTSRRPRPDSQPVSDGPSPLSSTPSDDASKASSDENSGCDNNPKRKEFNLNQYVSSVASAAAAEDDKSHMKSKTDGEFNLFFNNEPGHVLYNKRCSEGVLAPANWKGSSKSKDSLESESRGADMYGMNLGQPGASQDSFENDNRVKKVKLKVGGVMRTIQANSAPNGSSSSGSTAKSSQLSDASRPRQKQQGNSDDNQSPSDKRSGLQGIPWKNFSRDGFGIGKVDSMIGKISGKNTSSKQGEKTEPIRKSKRVPKRRLLDGEFGDDDDDDDEIRYLEKLKTSRISAVYRDEEEVSKKHRKLSIVADMETSASSRSVKDGKNKSRSDRMYEDTDYEDDEDSVSDVEPEHNKKRKQKKESVDVLMDSKRETTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAQMLASNTIRYVMGPAGTVVTFPEEMGLPSIFSSGPPSYPPPREKCAGPSCTNPYKYRDSRSKLPLCSLQCYKAVQGTLTAETIC 580
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0159 580 MobiDBLite consensus disorder prediction 365 393 - -
Lele08g0159 580 PANTHER INO80 COMPLEX SUBUNIT B 7 575 IPR029523 GO:0006338|GO:0031011
Lele08g0159 580 Coils Coil 474 495 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 335 352 - -
Lele08g0159 580 Coils Coil 428 462 - -
Lele08g0159 580 Pfam PAPA-1-like conserved region 436 521 IPR006880 GO:0031011
Lele08g0159 580 MobiDBLite consensus disorder prediction 312 494 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 427 490 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 180 226 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 394 409 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 263 284 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 27 71 - -
Lele08g0159 580 SMART PAPA_1_2 436 521 IPR006880 GO:0031011
Lele08g0159 580 MobiDBLite consensus disorder prediction 123 292 - -
Lele08g0159 580 Pfam HIT zinc finger 537 568 IPR007529 -
Lele08g0159 580 MobiDBLite consensus disorder prediction 312 326 - -
Lele08g0159 580 MobiDBLite consensus disorder prediction 1 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0159 Lele-ChrLele08 984872 987231 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0159 08 984872 987231 Lele08g0159 08 984872 987231 ECH
Lele07g0355 07 1980080 1983765 Lele08g0159 08 984872 987231 ECH
Lele05g0337 05 1925446 1928410 Lele08g0159 08 984872 987231 hybridization
Lele06g0155 06 953121 955539 Lele08g0159 08 984872 987231 hybridization