Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0355 ATGGAAGATTTGAGTGGCACCCAATTTGATGGCCTTGGCAACGCGGCAAGGAAGAAACGTAGTCAAACTTCTCGCCGGCCTCTGCCAGATCCACGGCCTGTTTCTGATGGTCCATCTCCCCTGTCATCAACACCTTCAGGTGATGCAAGCAAGGCCTCTAGTGATGAGAATAGTGGTTGTGATAATAATCCTAAGAGAAAAGAATTTAATCTTAACCAGTATGTCTCTAGTGTCCCCTCTGCTGCTGCAGCTGAAGATGATAAATCCCATATGAAGAGTAAAACGGATGGAGAATTCAATTTGTTTTTTAATGATGAGCCTGGACATGTCTTATATAACAAACGGTGCAGCGAGGGTGTCCTTGCTCCTGCTAACTGGAAAGGCTTCAGCAAATCAAAGGATAGCTTGGAATCAGAATCAAGAGGTGCAGATATGGTCAAAAAGGTTAAACTAAAGGTTGTTGGTGTAATGCGTACAATCCAATCTAACTCTGCTCCTAATGGTTCATCAAGCTGTGGGTCCACTGCAAAGAGCTCTCAGTTGTCAGATGCGTCCAGACCACGCCAAAAGCAACAGGGAAATTCAGATGATAACCAGTCCCCTTCAGATAAGAGGAGTGGCCTACAAGGCATTCCCTGGAAAAATTTCTCAAGGGATGGGTTTGGTCTTGGAAAGGTGGATATAAGGAAGATATCAGGAAAGAACGCATCCAGTAAGCAAGGTGACAAGACCGAACCAGTTCGTAAGAGCAAGCGAGTACCTAAGAGGCGTGTATTGGATGGGGAATTTGGTGACGATGACGATGAGAAGATTCGCTATTTGGAAAAGCTCAAAACATCAAAAGTTTCTGCAGTGTATAGAGACGAAGAAGAAGGAAGCAAGAAACATCGAAAATTATCTAGCGTCTCTGATATGGAAACTTCTGCCTCATCAAGGTCAGTCCAAGATGGTAAAAGCAAGTCCAGATTGGATGGAATGTATGAGGACACAGATTTTGAGGAAGACGAGGATTCTGTGTCTGATGTTGAGCCTGAGCACAAGAAAAAGAGAAAGCAGAAGAAGGAATCAGTTGATGTATTGGTGAATAGTAAGAGGGAAACAAGTCTCAGAACGCGCCAAAGGGCTCTTCAATCAAGCAAAGATTCCTCTGCATCTGGTGCGAGTCTAATTGAGTTTCCTAATGGATTACCACCCGCTCCACCTAGAAAACAAAAAGAAAAGCTTTCGGAGGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCTGAGGCTGAAGCTATAAGGAAAATACTCGGTCAAGACTCCAGCAGGAAGAAACGCGAAGAGAGAATGAAGAAACGCCAAGAAGAACTGGCACAGGAGAAGGCAGCTAATGCGCAGGTGCTCGCATCAAACACCATCAGGTATTTGATGGGTCCTGCTGGAACGGTTGTTACTTTTCCTCAGGAGATGGGCCTCCCTAGAATATTCAGCTCCAGAACCCCCAGTTATCCACCTCAGCGTGAGAAGTGCGCGGGTCCATCTTGCACCAACCCATACAAGTATCGGGATTCTAAGTCCAAGCTTCCCCTTTGCAGTCTGCAGTGCTACAAAGCCGTCCAGGACGACTTGCATTACATACTGCATATCAGTCCTTGGGAAACTGATACTCCTCTACCTTCAGTTTCAGTTTCCGTTTCAATTATGGACTCATAG 1734 0.4562 MEDLSGTQFDGLGNAARKKRSQTSRRPLPDPRPVSDGPSPLSSTPSGDASKASSDENSGCDNNPKRKEFNLNQYVSSVPSAAAAEDDKSHMKSKTDGEFNLFFNDEPGHVLYNKRCSEGVLAPANWKGFSKSKDSLESESRGADMVKKVKLKVVGVMRTIQSNSAPNGSSSCGSTAKSSQLSDASRPRQKQQGNSDDNQSPSDKRSGLQGIPWKNFSRDGFGLGKVDIRKISGKNASSKQGDKTEPVRKSKRVPKRRVLDGEFGDDDDEKIRYLEKLKTSKVSAVYRDEEEGSKKHRKLSSVSDMETSASSRSVQDGKSKSRLDGMYEDTDFEEDEDSVSDVEPEHKKKRKQKKESVDVLVNSKRETSLRTRQRALQSSKDSSASGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREERMKKRQEELAQEKAANAQVLASNTIRYLMGPAGTVVTFPQEMGLPRIFSSRTPSYPPQREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQDDLHYILHISPWETDTPLPSVSVSVSIMDS 577
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0355 577 Coils Coil 450 471 - -
Lele07g0355 577 Pfam HIT zinc finger 513 544 IPR007529 -
Lele07g0355 577 MobiDBLite consensus disorder prediction 241 265 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 160 265 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 403 466 - -
Lele07g0355 577 Coils Coil 404 438 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 160 206 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 341 371 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 372 389 - -
Lele07g0355 577 Pfam PAPA-1-like conserved region 412 497 IPR006880 GO:0031011
Lele07g0355 577 PANTHER INO80 COMPLEX SUBUNIT B 10 548 IPR029523 GO:0006338|GO:0031011
Lele07g0355 577 MobiDBLite consensus disorder prediction 282 302 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 39 71 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 1 71 - -
Lele07g0355 577 MobiDBLite consensus disorder prediction 282 469 - -
Lele07g0355 577 SMART PAPA_1_2 412 497 IPR006880 GO:0031011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0355 Lele-ChrLele07 1980080 1983765 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0355 07 1980080 1983765 Lele07g0355 07 1980080 1983765 ECH
Lele07g0355 07 1980080 1983765 Lele08g0159 08 984872 987231 ECH
Lele05g0337 05 1925446 1928410 Lele07g0355 07 1980080 1983765 hybridization
Lele06g0155 06 953121 955539 Lele07g0355 07 1980080 1983765 hybridization