Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0155 ATGGAAGATTTGGGTGGTACCCGATTTGATGGCCTTGGCAATGCTGCAAGGAAGAAACGTAGTCAAACTTCTCGCCGGCCTCGGCCAGATTCACAGCCTGTTTCTGATGGTCCATCTCCCCTGTCGTCAACACCTTCAGATGATGCAAGCAAGGCCTCTAGTGATGAGAATAGTGGTTGTGATAATAATCCTAAGAGAAAAGAATTTAATCTTAACCAGTATGTCTCCAGTGTCGCCTCTGCTGTTGCAGCTGAAGATGATAAATCCCATATGAAGAGTAAAACGGATGGAGAATTCAATTTGTTTTTTAATAATGAGCCTGGACATGTTTTATATAACAAACGGTGCAGTGAGGGTGTCCTTGCTCCTGCTAACTGGAAGGGCTCCAGCAAATCGAAGGATAGCTTGGAATCAGAATCAGGAGGTGCAGATATGTATGGTATGAACTTGGGGCAGCCAGGAGCTTCTCAGGATAGCTTCGAGAATGATAACAGGGTCAAAAAGGTTAAACTAAAGGTTGGTGGTGTGATGCGTACGATTCAAGCTAACTCTGCTCCTAATGGTTCATCAAGCAGTGGATCCACTGCAAAGAGCTCTCAGTTGTCAGATGCGTCCAGACCACGCCAAAAGCAGCAGGGAAATTCAGATGATAACCAGTCCCCTTCAGATAAGAGGAGTGGCCTACAAGGCATTCCATGGAAAAATTTCTCAAGGGATGGGTTTGGTATTGGAAAGGGGGATTCTATGGTAGGGAAGATACCAGGAAAGAACACATCCAGTAAGCAAGGCGACAAGACTGAACCACTTCGTAAGAGCAAGCGAGTACCTAAGAGGCGTTTATTGGATGGGGAATTTGGTGATGATGACGATGACGATGACGATGACGAGATTCGCTATTTGGAAAAGCTCAAAACATCAAAAATTTCTGCAGTGTATAGAGATGAAGAAGAAGTAAGCAAGAAACATCGAAAATTATCTAGTGTATCTGATATGGAAACTTCTGCCTCATCAAGGTCAGTTAAAGATGGTAAAAACAAGTCCAGATCAGATAGAATGTATGAGGACACGGATTATGAGGATGATGAGGATTCTGGGTCTGATGTTGAGGCTGAGCACAACAACAAGAGAAAGCAGAAGAAGGAATCTGTTGATGTATTGATGGATAGTAAGAGGGAAACAACTCTCACAACACGCCAAAGAGCTCTTCAATCAAGCAAAGATGCCTCTGCATCTGGTGCAAGTCTAATTGAGTTTCCTAATGGATTACCGCCTGCTCCACCTAGAAAGCAAAAAGAAAAGCTTTCGGAGGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAGGCCGCTAGGGAATCTGAGGCTGAAGCTATAAGAAAAATACTCGGTCAAGACTCCAGCAGGAAGAAACGGGAAGAGAAAATGAAGAAGCGCCAAGAAGAACTGGCACAGGAGAAGGCAGCTAATGCGCAGATGCTCGCGTCAAATACCATCAGATATGTGATAGGTCCAACTGGAACTGTTGTTACTTTTCCTGAGGAGATGGGTCTCCCTAGCATATTCAGCTCCAGACCCCCCAGTTATCCACCACCGCGTGAGAAGTGCGCGGGTCCATCTTGCACCAACCCATACAAGTATCGGGATTCGAAGTCCAAGCTTCCCCTTTGCAGTCTGCAGTGCTACAAAGCAGTCCAAGGGACGTTGACGGCTGAAACCATCTGTTGA 1749 0.4557 MEDLGGTRFDGLGNAARKKRSQTSRRPRPDSQPVSDGPSPLSSTPSDDASKASSDENSGCDNNPKRKEFNLNQYVSSVASAVAAEDDKSHMKSKTDGEFNLFFNNEPGHVLYNKRCSEGVLAPANWKGSSKSKDSLESESGGADMYGMNLGQPGASQDSFENDNRVKKVKLKVGGVMRTIQANSAPNGSSSSGSTAKSSQLSDASRPRQKQQGNSDDNQSPSDKRSGLQGIPWKNFSRDGFGIGKGDSMVGKIPGKNTSSKQGDKTEPLRKSKRVPKRRLLDGEFGDDDDDDDDDEIRYLEKLKTSKISAVYRDEEEVSKKHRKLSSVSDMETSASSRSVKDGKNKSRSDRMYEDTDYEDDEDSGSDVEAEHNNKRKQKKESVDVLMDSKRETTLTTRQRALQSSKDASASGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAQMLASNTIRYVIGPTGTVVTFPEEMGLPSIFSSRPPSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQGTLTAETIC 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0155 582 MobiDBLite consensus disorder prediction 396 411 - -
Lele06g0155 582 PANTHER INO80 COMPLEX SUBUNIT B 7 577 IPR029523 GO:0006338|GO:0031011
Lele06g0155 582 MobiDBLite consensus disorder prediction 123 491 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 429 491 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 368 395 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 180 226 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 263 284 - -
Lele06g0155 582 Coils Coil 476 497 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 337 354 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 27 71 - -
Lele06g0155 582 Pfam HIT zinc finger 539 570 IPR007529 -
Lele06g0155 582 SMART PAPA_1_2 438 523 IPR006880 GO:0031011
Lele06g0155 582 MobiDBLite consensus disorder prediction 1 71 - -
Lele06g0155 582 Coils Coil 430 464 - -
Lele06g0155 582 MobiDBLite consensus disorder prediction 297 328 - -
Lele06g0155 582 Pfam PAPA-1-like conserved region 438 523 IPR006880 GO:0031011
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0155 Lele-ChrLele06 953121 955539 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0155 06 953121 955539 Lele06g0155 06 953121 955539 ECH
Lele05g0337 05 1925446 1928410 Lele06g0155 06 953121 955539 ECH
Lele06g0155 06 953121 955539 Lele07g0355 07 1980080 1983765 hybridization
Lele06g0155 06 953121 955539 Lele08g0159 08 984872 987231 hybridization