Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0337 ATGGAAGATTTGGGTGGTACCCGATTTGATGGCCTTGGCAATGCGGCAAGGAAGAAACGAAGTCAAACTTCTCGCTGGCCTCGGCCAGATTCACGGCCTGTTTCTGATGGTCCATCTCCCCTGTCATCAACACCTTCAGATGATGCGAGCAAGGCCTCTAGTGATGAGAATAGTGGTTGTGATAATCATCCTAAGAGAAAAGAATTTAATCTTAACCAGTATGTCACTAGTGTCCCCTCTGCTGCTGCAGCTGAAGATGATAAATCCCATATGAAGAGTAAAACGGATGGAGAATTCAATTTGTTTTTTAATGATGAGCCTGGAAATGTTTCATATAACAAACGGTGCAGCGAGGGTGTCCTTGCTCCTGCTAACTGGAAAGGCTTTAGCAAATCAAAGGATAGCTTGGAATCAGAATCAAAAGGTGCAGATATGTATCGTATGAACTTGGGGCTGCCAGGAGCTTCTCAGGATAGCTTCGAGAATGATAACAGGATCAAAAAGGTTAAACTAAAGGTTGGTGGTGTAATATGTACGATCCAATCTAACTCTTCTCCTAATGGTTCATCAAGCAGTGGGTCCACTGCAAAGAGCTCTCAGTTGTCAGATGCGTCCAGACCACGCCAAAAGCAACAGGGAAATTCAGATGATAACCAGTCCCCTTCAGATAAGAGGAGTGGCCTAAAAGGCATTCCCTGGAAAAATTTCTCAAGCGATGGGTTTGGTCTTGGAAAGGTGGATATAAGGAAGATATCAGGAAAGAACACATCCAGTAATCAAGGCAACAAGACCGAACCAGTTCGTAAGAGCAAGCGAGTACCTAAGAGGCGTGTCTTGGATGGGGAATTTGGTGACAACGACAATGACGATGACAAGATTCTCTATTTGGAAAAGCTCAAAACATCAAAAGTTTCTGCAGTGTATAGAGACGAAGAAGAAGTAAGCAAGAAACATCGAAAATTATCTAGAGTCTCTGATATGGAAACTTCTGCCTCATCAAGGTCAGTCAAAGATGGTAAAAGCAAGTCCAGTTTGGATAGAATGTATGAGGACACGGATTATGAGGAAGGCGGGGATTCTGTGTCTGATGTTGAGCCTGAGCACAAGAAAAAGAGAAAGCAGAAGAAGGAATCAGTTGATGTATTGGTGAATAGTAAGGGGGAAACAACTCTCAGAACGCGCCAAAGGGCTCTTCAATCAAGCAAAGATTCCTCTGCATCTGGTGCGAGTCTAATTGAGTTTCCTAATGGATTACCACCTGCTCCACCTAGAAAACAAAAAGAAAAGCTTTCGGAGGTGGAGCAGCAACTAAAGAAAGCTGAGGCTGCCCAGAGGCGTAGAATGCAAGTTGAGAAGGCTGCTAGGGAATCCGAGGCTGAAGCTATAAGGAAAATACTCGGTCAAGACTCCAGCAGGAAGAAACGCGAAGAGAAAATGAAGAAACGCCAAGAAGAACTGGCACAGGAGAAGGCAGCTAATGCGCAGATGCTCGCATCAAACACCATCAGATATGTGATGGGTCCTGCTGGAACGGTTGTTACTTTTCCTGAGGAAATGGGCCTCCCTAGCGTATTCAGCTCCAGAACCCCCAGTTATCCACCTCCGCGTGAGAAGTGCGCGGGTCCATCTTGCACCAACCCATACAAGTATCGGGATTCTAAGTCCAAGCTTCCCCTGTGCAGTCTGCAGTGCTACAAAGCCGTCCAGTGGACGTTGAAGGCTGAAACCATCTGAGATCTCTCTGTTCCCATCACTATGCTTTTTGCAAGGATGCTGGATAATAGGAAGGTACATGGCTCCAAATTGCAGTCTTATCAACTTCTGTTGGCATCTGCGAGGCTCAATTTCGGTGGTTCAAGTTCACAGCCCCAAAATACCTTTATTTTTTTTCAATCAGAAGATGACTTGCATTACATACTGCATATCAGTCCTTGGGAAACTGATACTCCTCTACCTTCAGTTTCAGTTTCAGTTTCCGTTTCCGTTTCAATTATGGACTCAGAGATAAGGGCATTATCACTCCTCTCAAAGCTCACAAGCCATTATCGGCAGCAGTAG 2058 0.45 MEDLGGTRFDGLGNAARKKRSQTSRWPRPDSRPVSDGPSPLSSTPSDDASKASSDENSGCDNHPKRKEFNLNQYVTSVPSAAAAEDDKSHMKSKTDGEFNLFFNDEPGNVSYNKRCSEGVLAPANWKGFSKSKDSLESESKGADMYRMNLGLPGASQDSFENDNRIKKVKLKVGGVICTIQSNSSPNGSSSSGSTAKSSQLSDASRPRQKQQGNSDDNQSPSDKRSGLKGIPWKNFSSDGFGLGKVDIRKISGKNTSSNQGNKTEPVRKSKRVPKRRVLDGEFGDNDNDDDKILYLEKLKTSKVSAVYRDEEEVSKKHRKLSRVSDMETSASSRSVKDGKSKSSLDRMYEDTDYEEGGDSVSDVEPEHKKKRKQKKESVDVLVNSKGETTLRTRQRALQSSKDSSASGASLIEFPNGLPPAPPRKQKEKLSEVEQQLKKAEAAQRRRMQVEKAARESEAEAIRKILGQDSSRKKREEKMKKRQEELAQEKAANAQMLASNTIRYVMGPAGTVVTFPEEMGLPSVFSSRTPSYPPPREKCAGPSCTNPYKYRDSKSKLPLCSLQCYKAVQWTLKAETIXDLSVPITMLFARMLDNRKVHGSKLQSYQLLLASARLNFGGSSSQPQNTFIFFQSEDDLHYILHISPWETDTPLPSVSVSVSVSVSIMDSEIRALSLLSKLTSHYRQQ 685
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0337 685 MobiDBLite consensus disorder prediction 306 325 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 36 57 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 333 351 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 130 165 - -
Lele05g0337 685 SMART PAPA_1_2 434 519 IPR006880 GO:0031011
Lele05g0337 685 MobiDBLite consensus disorder prediction 275 291 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 383 411 - -
Lele05g0337 685 Coils Coil 472 493 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 425 486 - -
Lele05g0337 685 Pfam HIT zinc finger 535 566 IPR007529 -
Lele05g0337 685 Pfam PAPA-1-like conserved region 434 519 IPR006880 GO:0031011
Lele05g0337 685 PANTHER INO80 COMPLEX SUBUNIT B 7 571 IPR029523 GO:0006338|GO:0031011
Lele05g0337 685 MobiDBLite consensus disorder prediction 306 486 - -
Lele05g0337 685 Coils Coil 426 460 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 177 225 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 361 382 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 177 291 - -
Lele05g0337 685 MobiDBLite consensus disorder prediction 1 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0337 Lele-ChrLele05 1925446 1928410 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0337 05 1925446 1928410 Lele05g0337 05 1925446 1928410 ECH
Lele05g0337 05 1925446 1928410 Lele06g0155 06 953121 955539 ECH
Lele05g0337 05 1925446 1928410 Lele07g0355 07 1980080 1983765 hybridization
Lele05g0337 05 1925446 1928410 Lele08g0159 08 984872 987231 hybridization