Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1225 ATGGAGGAGGGACTCCGGTATGGTTCTAATGATGCTCTTAAGAAGGAGGATTCATTCGATGGACCCAAAGACCCTCTATCTCTACATTTTCGTTCTTCCTGGTTCATTGGAGGAGTCGGTATGTTTGTTGCACAAAGTAAATCGAGCAGATATTTGAGTCGCGGCTTGGGATGGCTACCCACAGAATCTGCTCATACACACACACCTCAGTTCGTTTCATTCTCATACTCTCAGTTGAAGTCGTCACATTCGAAGGGCAACAAGTACGGCACCGATCTATTCTCTGATATAACTTCCGCGTATTGCCTAATGCCTAGAATGGCCAGAAGCCTGGGAGGATTTCTGGCGCTATTTTGGGCTCTTTCGATCTGCGAAGCTGCGACAAATTTTGAGCCGATCTCTGAGTCTTACCGATCCGTGGCCTTAGAACTTTTCACTCCCATTGATGGATCGTTTTCTAGCTTAGAAGATGCATACGAGGCCTTGAGAGTTTTTAAGATTCTTGCCGTTGAAAAGAAGCCAGATGTCAGCACAACTACTTGTCCGAGAGTATTGGAAAATCTTGGGTCATCGTCTCCTCTGAAGGATTTGTTCTATGCCTTAAAAGTTAATAGCTTACTAAAATGTGGGGTCGATGAGGAGGTTTTCAAGGATATTGCTTCACGAATTAAAGCCACAATCAACAATGCAAGTACTTTGCTTGACTTATACTACTCAATAGGGAGTTTGATTCTTATCAAGGATCATGCTTCTAATGTTGATGTCCTTTTGGCTGATGCTGATGGAACTTTTCGTTTTATTAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGTTACAGCTCTACTAATCCAGACCCTAGTACCTATGCTGCTGGGTTAGCACTTGAAGCACTTGCTGGAGTGGTCTCACTGGCATCTTCAGAAATTGATCACTCTAGGATCAATGCAGTGAAAAATGATATATTGAAGCTATTTGACAGGATTGAATATTATGATGATGGAACCTTTTATTTCGATGAGAAGATAGTTGGTCCTGGTGAACAACTGGGTTCCCTTTTCACTACAGCTTCAGTTTTTCGAGGGCTTACAGCATTTGCAGCTGCAATTTCTGGAAAAATAAATCTTCCAGAGGATAAAATTTTGGGTTTAGCAAGATTCTTCCTGGGTATTGGAATACCAGAGGATGCAAAGGATTTCTTCAATCAAGTAGAGTCATTAGCTTTTCTAGAGAGCAATAGGGTTTCCATCCCATTAATATTGTCAGTTCCTACAACAGTTTACTCGTTGACCCAGAAAGAGCAGCTTAAGGTTAGGGTGAATACAGTACTTGGTGCTGCTGCTCCAGCTCTAACAGTTAAGCTTGTCCGAGCTTTCAGAACTGGGTCTAAAGGTTCAGCTGTTTTTGAGAGTAAAGAGCTCCGGTATGAGCCAACAAGTGGACTTCATGTCTTAGATGTTTTCTCAGAGAATGTAGATGTGGGATCTTTTGTGTTTGTTTTTGAGATGGTCCTTGAAGATTCGAATAGAAGAAGTGATTATGCTACTGGGGGCCAAACTCATGTGCCAATATACATCACCGGAGTTATTAAAGCTGGCAATGCTGAAATTGCAGTATTGGACAGTGATCTTGGAAGCATTGAAACCCAAAACACGCTAGATTTAACTGGAAATGGTGTAGTTTCACTATCAGCTAACCACCTGGCAAAGTTACGGTTGTCTTTTCAATTGACGACATCTCATGGTCATGCTTTTAAGCCTCAACAGGCATTTCTGAAGTTGAGACATGAGACAAATGTTGAGCACATATTTGTGGTTGGGAGTACCGGCAAGAAGTTTGAAATTGTTCTAGACTTTCTTGGTTTGGTGGAGAAATTTTATCATCTCTCTGGCAGATATGACATTGAGCTGACAATTGGAGATGCTGTAATGGAAAACTCTTTCCTGCGACCTCTTGGCCATGTTGAATTGGATCTTCCAGTAGCTCCTGAGAAGGCAGCCCGTCCCCCATCACCACCAGTCGATCCTTACTCAAGATATGGGCCCAAAGTAGAGATAACTCACTTATTTAGGGCTCCTGAAAAGCGACCACCTCAAAATGTGTCTCTCACTTTCTTGAGTTTGACCCTTCTGCCTTTTGTTGGCTTTTTGGTTGGGCTATTACGCTTAGGAGTGAACCTAAAGAATTTCCCTTCAGCAACAGTACCTGCTACATATGCCATCCTCTTCCATGCTGGCATTGCTGCAGTTCTGCTACTTTATTTATTTTTCTGGTTACAGCTGGACCTGTTCACTACGCTGAAAACACTGGGTATTTTGGGAGCCTTTTTAATATTTGTGGGACATGGAATTTTATCTCATCTGGCTTCTTCATCAGCCAAGTTGAAGTCTGCCTGA 2394 0.4248 MEEGLRYGSNDALKKEDSFDGPKDPLSLHFRSSWFIGGVGMFVAQSKSSRYLSRGLGWLPTESAHTHTPQFVSFSYSQLKSSHSKGNKYGTDLFSDITSAYCLMPRMARSLGGFLALFWALSICEAATNFEPISESYRSVALELFTPIDGSFSSLEDAYEALRVFKILAVEKKPDVSTTTCPRVLENLGSSSPLKDLFYALKVNSLLKCGVDEEVFKDIASRIKATINNASTLLDLYYSIGSLILIKDHASNVDVLLADADGTFRFIKALSQSDGRWRYSSTNPDPSTYAAGLALEALAGVVSLASSEIDHSRINAVKNDILKLFDRIEYYDDGTFYFDEKIVGPGEQLGSLFTTASVFRGLTAFAAAISGKINLPEDKILGLARFFLGIGIPEDAKDFFNQVESLAFLESNRVSIPLILSVPTTVYSLTQKEQLKVRVNTVLGAAAPALTVKLVRAFRTGSKGSAVFESKELRYEPTSGLHVLDVFSENVDVGSFVFVFEMVLEDSNRRSDYATGGQTHVPIYITGVIKAGNAEIAVLDSDLGSIETQNTLDLTGNGVVSLSANHLAKLRLSFQLTTSHGHAFKPQQAFLKLRHETNVEHIFVVGSTGKKFEIVLDFLGLVEKFYHLSGRYDIELTIGDAVMENSFLRPLGHVELDLPVAPEKAARPPSPPVDPYSRYGPKVEITHLFRAPEKRPPQNVSLTFLSLTLLPFVGFLVGLLRLGVNLKNFPSATVPATYAILFHAGIAAVLLLYLFFWLQLDLFTTLKTLGILGAFLIFVGHGILSHLASSSAKLKSA 797
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1225 797 Pfam Oligosaccharyltransferase subunit Ribophorin II 115 789 IPR008814 GO:0006487|GO:0008250|GO:0016020
Lele06g1225 797 SUPERFAMILY Terpenoid cyclases/Protein prenyltransferases 224 364 IPR008930 -
Lele06g1225 797 PANTHER RIBOPHORIN II 118 796 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1225 Lele-ChrLele06 7726175 7735254 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1905 13 26765390 26769149 Lele06g1225 06 7726175 7735254 CCT
Lele14g1842 14 25113262 25116662 Lele06g1225 06 7726175 7735254 CCT
Lele15g0503 15 2952971 2956724 Lele06g1225 06 7726175 7735254 CCT
Lele16g0524 16 2895514 2898938 Lele06g1225 06 7726175 7735254 CCT
Lele06g1225 06 7726175 7735254 Lele06g1225 06 7726175 7735254 ECH
Lele06g1225 06 7726175 7735254 Lele07g1424 07 8622719 8633613 hybridization
Lele06g1225 06 7726175 7735254 Lele08g1221 08 7694351 7703571 hybridization