Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1856 ATGAGATTATATGATATGATCTTCAGTGTTGGCGTTTAGAATAAGAAACAGAAAATGTTGAAAGGGAGGGTAGAGAAAGAAAGGGATAATGATTTAGAACGAGATGAACTTGGGAAAGGTATTAGGAGCCTTGACAAGGAATCGGACGATGAATGTGCTAATATGGAAGGACCAACAAAGAAGGAAATCCGGTGCTCAAAGACCATGAAGTTAGGGACCACCAGAGTACGGAAAAATGCAAAAGCACAGTACTACACAGTACAGAAGCAAAGATCCATGACGACATTGCGTTTCTCTCCTCCTTTCCAAACAAAGAATACAAATTTCTTCTCTTTTCGTCTCCCTCGGGCCGTTTTGCATAACATGGAGAGAGCATCGTCGGAGCTGGTGGATTTCCCATTGTTGCTACGTTCCAATTACAGAGCCGGCACTATTCCTTATAGACTTCTCTCCGATGATCCTCTCAAGCCCACTCCCACCGAGCTTTCTTGGATTAATCTTCTTCTTGGCACCATCCCTTCCTTCAAGAAGCGTGCCGAGAGTGATCCTTCTGTTCCTGATGCTGCTAATAGAGCTGAGAAATTTGCTCAAAGATATGCTGAAATACTCGAAGATTTCAAGAAGAATCCTGAAAGTCATGGCTGGAAACTTGATGGAATTATTATCTGCAGTCTTCGCGAGCAAATACTAAGAGAATTAGGATTCAGAGATATCTTTAAGCAAGTTAAGGAAGAAGAAAATGCGAAAGCCATGACCCTGTTTGAGGATGTTGTCCGACTTAATGATGCTATTGAGGATGAAGACAAGAGACTTGAGAATCTAGTTAGAGGGATTTTTGCAGGAAACATATTTGATCTTGGTTCTGCACAGCTTGCAGAGGCTTATGCTAGGGAGGGAGTGTCCTTTTTAACTACTTGTCAAAATCTCGTACCTCGACCTTGGGTCATTGATGACCTCGACCCTTTCAAACTGAAATGGAGCAAGAAATCATGGAAGAAGGTTATCATATTTGTTGATAATTCCGGTGCCGATATCGTTTTGGGTATTTTGCCATTTGCAAGGGAGCTGCTTCGGCATGGAATTCAGGTTGTATTGGCTGCTAACGAGTTACCTTCCATTAACGATGTAACTTACCCTGAGTTAGTTGAAATTATATCAAAGTTGAAGGATGAAGAAGGACGGCTAATGGGCGTCGATACTTCAAATCTTGTAATTGCTAACTCTGGCAACGATTTGCCTGTTATTGATCTTACCCGGGTATCACAAGAAATTGCGTGCCTGGCCACTGATACAGATCTAGTCATATTAGAAGGGATGGGTCGTGGTATAGAAACAAATCTGCATGCTGACTTTACATGTGACTCTCTCAAGATTGGAATGGTTAAACATCCTGAAGTTGCAGAATTTCTTGGGAGCCGTCTTTATGACTGTGTGTTTAAATTCAAACAAGTTCCCAGTTTACAATGTTGA 1470 0.417 MRLYDMIFSVGVXNKKQKMLKGRVEKERDNDLERDELGKGIRSLDKESDDECANMEGPTKKEIRCSKTMKLGTTRVRKNAKAQYYTVQKQRSMTTLRFSPPFQTKNTNFFSFRLPRAVLHNMERASSELVDFPLLLRSNYRAGTIPYRLLSDDPLKPTPTELSWINLLLGTIPSFKKRAESDPSVPDAANRAEKFAQRYAEILEDFKKNPESHGWKLDGIIICSLREQILRELGFRDIFKQVKEEENAKAMTLFEDVVRLNDAIEDEDKRLENLVRGIFAGNIFDLGSAQLAEAYAREGVSFLTTCQNLVPRPWVIDDLDPFKLKWSKKSWKKVIIFVDNSGADIVLGILPFARELLRHGIQVVLAANELPSINDVTYPELVEIISKLKDEEGRLMGVDTSNLVIANSGNDLPVIDLTRVSQEIACLATDTDLVILEGMGRGIETNLHADFTCDSLKIGMVKHPEVAEFLGSRLYDCVFKFKQVPSLQC 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1856 489 Gene3D Uncharacterised protein PF01937, DUF89, domain 3 315 484 - -
Lele06g1856 489 PANTHER PANTOTHENATE KINASE 130 213 IPR004567 GO:0004594|GO:0005524|GO:0015937
Lele06g1856 489 FunFam Pantothenate kinase 4 147 236 - -
Lele06g1856 489 Gene3D Uncharacterised protein PF01937, DUF89, domain 2 237 299 - -
Lele06g1856 489 SUPERFAMILY AF1104-like 143 482 IPR036075 -
Lele06g1856 489 Pfam Damage-control phosphatase ARMT1-like domain 173 476 IPR002791 -
Lele06g1856 489 FunFam Pantothenate kinase 315 483 - -
Lele06g1856 489 Gene3D - 147 236 IPR035073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1856 Lele-ChrLele06 13054418 13063875 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele45g0270 45 2197279 2199940 Lele06g1856 06 13054418 13063875 CCT
Lele46g0293 46 1938204 1940659 Lele06g1856 06 13054418 13063875 CCT
Lele06g1856 06 13054418 13063875 Lele07g2061 07 13858310 13862244 hybridization
Lele06g1856 06 13054418 13063875 Lele08g1856 08 12915267 12926898 hybridization