Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0672 ATGTCTTCCTGCTTTCGCCCCTCCCTTCCCACCAATGACGGCGCTCTTCCTCCTCCTCCTCCACTCTCCACCAACACCAACCTCACCACCTATCTGTACCACACCGACGCCGGCGTCGTCTCCCTCACTTGGTCACGCTCCATTCTAGGTCGCTCCCTCCATCTTCATGTCCATCATCCCCCTTACGATTCCCCTCTTCCTCCTTCTACTTCTTTCACTCCCGCTTCCTTTCACCTCCACATCAAGCCCTTCGTTTTCTGGAAAAAGCATGGAACCAAGAAGCTTTCTGACAACACTTTTATCTTTTGGAATCTCTCCAGAGCTAAATTTGGGTCCGGACCTGAGCCCCGCTCCGGTTTCTACGTTGCGCTGGTTGTGGACAAGGAGATGATTCTTGTGGTCGGCGATCTCAATAAGGACGCGTACGCCAAGACTAAAGCTAGCGAGCCCAAGAATTCCCAGCTTCTGGTTCTCAAAAGGGAGCATGTGGTGGCCAACAAAATCTACACTACAAGAGCCAAGTTCGGGGGCAGAATGAGAGAGATACAGATAGATTGCGGGTACAGGGACGACTCTAGGCTCTGCTTCAGCGTGGATGGGAAAGTTGTGCTTCAGATCAAGCGATTGAAGTGGAAATTTAGGGGGAATGAGAGAGTCGAAGTGGACGGAGTACCGGTTCAGATCTCGTGGGACGTCTACAATTGGCTATTTGAGAGAGAGAACGGGGATGGGCACGCCATTTTTATGTTCAAAATCGAGGAAGAAGATGAAGAAGGAGGTAAGGAAGTAGCAGGGGACAGAAATCTGGTGAATCTGTGGACGCAGCAAAACTGGCATTTGGGGCCGAATGAATGGGGGAGAATAGGCAAGAGCTTCTCGTCGTCGTCGGTGTCGGTGTCATCGTCGGCGGGATCTTTTGGCGGAAGCTCCTCCGTGATGGAATGGTCCAGCGTGGAGGAGAACGAGTTGGTGGTGCCCATCGGATTTTCCTTGCTCGTTTATGCCTGGAAAAGGTGA 1017 0.5202 MSSCFRPSLPTNDGALPPPPPLSTNTNLTTYLYHTDAGVVSLTWSRSILGRSLHLHVHHPPYDSPLPPSTSFTPASFHLHIKPFVFWKKHGTKKLSDNTFIFWNLSRAKFGSGPEPRSGFYVALVVDKEMILVVGDLNKDAYAKTKASEPKNSQLLVLKREHVVANKIYTTRAKFGGRMREIQIDCGYRDDSRLCFSVDGKVVLQIKRLKWKFRGNERVEVDGVPVQISWDVYNWLFERENGDGHAIFMFKIEEEDEEGGKEVAGDRNLVNLWTQQNWHLGPNEWGRIGKSFSSSSVSVSSSAGSFGGSSSVMEWSSVEENELVVPIGFSLLVYAWKR 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0672 338 MobiDBLite consensus disorder prediction 1 21 - -
Lele04g0672 338 Pfam Plant protein of unknown function (DUF868) 26 337 IPR008586 -
Lele04g0672 338 PANTHER EXPRESSED PROTEIN 23 337 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0672 Lele-ChrLele04 4058915 4059931 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele04g0672 27 258 EF-hand Containing Proteins AT5G28150 38.017 1.94e-52 173
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0658 28 4200494 4202478 Lele04g0672 04 4058915 4059931 CCT
Lele01g0672 01 3912800 3913813 Lele04g0672 04 4058915 4059931 hybridization
Lele02g0654 02 3913760 3915548 Lele04g0672 04 4058915 4059931 hybridization