Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0672 ATGTCTTCTTGCTTTCGCCCCTCCCCTACCGCCAACGACGCTCCTCCTCCTCCTCCTCCGCCACTGTCCACCCATCCCAACCTCACCACCTATCTCTACCACACCGAAGCCGGCGTCGTCTCCTTCACTTGGTCACGCTCCATTCTAGGTCGCTCCCTCCATCTTCACCTCCAACATCCCCCTTACGATTCCCCTCTCCCTCCTTCTACGTCTCCCACTTCCGCTTCCTTTCACCTCCACATCAAGCCCTTCGTTTTCTGGAAAAAGCATGGAACGAAGAAGCTTTCCGACAACACTCTCATCTCCTGGAATCTCTCCAGAGCTAAATTTGGGTCTGGACCTGAGCCCCACTCTGGTTTCTACGTTGCCCTGGTTGTGGACAAGGAGATGATTCTTCTGGTCGGCGATCTCAATAAGGATGCGTACGCCAAGACTAAAGCTCTCGAACCCAAGAATTCCCAGCTTCTGGTTCTCAAGAGGGAGCATGTGGTGGCCAACAAAATCTACACTACAAGAGCCAGGTTCGGGGGCAAAATGAGAGAGATACAGATAGATTGCGGGTACAGGGACGACTCCAGGCTCTGCTTCAGCGTGGATGGGAAAGTTGTGCTTCAGATCAAGCGATTGAAATGGAAATTTAGAGGGAATGAGAGAGTAGAAGTGGACGGGGTACCGGTTCAGATCTCGTGGGACGTCTACAATTGGCTATTTGAGAGAGAGAACGGTGATGGGCACGCCATTTTTATGTTCAAAATCGAGGAAGAAGATGAAGGAGGTAAGGGACTAGCAGGGGACAGAAATCTGGTGAATCCGTGGACGCAGCAAAACTGGCATTTGGGGCCGAATGAATGGGGTAGAATAGGCAAGAGTTTCTCCTCGTCGTCGGTGTCAGTGTCTTCGTCGGCGGGATCTTTTGGTGGAAGCTCCTCCGTGATGGAATGGTCCAGCCTGGAGGAGAACGAGTTGGTGGTGCCCATCGGATTTTCCTTGCTTGTTTATGCCTGGAAAAGGTGA 1014 0.5217 MSSCFRPSPTANDAPPPPPPPLSTHPNLTTYLYHTEAGVVSFTWSRSILGRSLHLHLQHPPYDSPLPPSTSPTSASFHLHIKPFVFWKKHGTKKLSDNTLISWNLSRAKFGSGPEPHSGFYVALVVDKEMILLVGDLNKDAYAKTKALEPKNSQLLVLKREHVVANKIYTTRARFGGKMREIQIDCGYRDDSRLCFSVDGKVVLQIKRLKWKFRGNERVEVDGVPVQISWDVYNWLFERENGDGHAIFMFKIEEEDEGGKGLAGDRNLVNPWTQQNWHLGPNEWGRIGKSFSSSSVSVSSSAGSFGGSSSVMEWSSLEENELVVPIGFSLLVYAWKR 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0672 337 MobiDBLite consensus disorder prediction 10 25 - -
Lele01g0672 337 PANTHER EXPRESSED PROTEIN 3 336 IPR008586 -
Lele01g0672 337 Pfam Plant protein of unknown function (DUF868) 26 336 IPR008586 -
Lele01g0672 337 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0672 Lele-ChrLele01 3912800 3913813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0672 27 270 EF-hand Containing Proteins AT5G28150 36.614 6.20e-51 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0658 28 4200494 4202478 Lele01g0672 01 3912800 3913813 CCT
Lele01g0672 01 3912800 3913813 Lele03g0668 03 3922548 3923564 hybridization
Lele01g0672 01 3912800 3913813 Lele04g0672 04 4058915 4059931 hybridization