Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g0654 ATGTCTTCCTGCTTTCGCCCCTCCCTTCCCACCAATGACGGCGCTTCTCCTCCTCCTCCGCCACTATCAACCAACACCAACCTCACCACCTATCTCTACCACACCGAGGCCGGCGTCGTCTCCCTCACTTGGTCTCGCTCCATTATAGGTCGCTCCCTCCATCTTCACCTCCATCATCCCCCTTACGATTCCCCTCTTCCTCCTCCTACTTCTATCACTCCCGCTTCCTTTCACCTCCACATCAAGCCCTTTGTTTTCTGGAAAAAGCATGGAACCAAGAAGCTTTCTGACAACGCTCTCATTTTTTGGAATCTCTCCAGAGCTAAATTTGGGTCTGGACCTGAGCCCCACTCCGGTTTCTACGTTGCGCTGGTTGTGGACAAGGAGATGATTCTTGTGGTCGGCGATCTCAATAAGGACGCGTACGCCAAGACTAAAGCATGCGAGCCCAAGAATTCCCAGCTTCTGGTTCTCAAAAGGGAGCATATGGTGGCCAACAAAATCTACTCTACAAGAGCCAAGTTCGGGGGCAGAATGAGAGAGATACAGATAGATTGCGGGTACAGGGACGACTCCAGGCTCTGCTTCAGCGTGGATGGGAAAGTTGTGCTTCAGATCAAGCGATTGAAGTGGAAATTTAGGGGGAATGAGAGAGTCGAAGTGGACGGAGTACCGGTTCAGATCTCGTGGGACGTCTACAATTGGCTATTTGAGAGAGAGAACGGGGATGGGCACGCCATTTTTATGTTCAAAATCGAGGAAGAAGATGAAGAAGGAGGTAAGGAAGTAGCAGGGGACAGAAATCTGATGAATCTGTGGACGCAGCAAAACTGGCATTTGGGGCCGAATGAATGGGGGAGAATAGGCAAGAGCTTCTCGTCGTCGTCGGTGTCAGTGTCATCGTCGGCGGGATCTTTTGGCGGAAGCTCCTCCGTGATGGAATGGTCCAGCGTGGAAGAGAACGAGTTGGTGGTGCCCATCGGATTTTCCTTGCTCGTTTATGCCTGGAAAAGAATTGTTTTGCGTGAGAAGCGTAATCATGGAATTGTTTCGTTGCCAGTTGTGGAATTTTATTCTAGGGAGGGCCTCTCCTCGTTGGTTGTTTTGCTTGCTGTTACCGTTATGAACCAAGAATTTGGTTGGCCCTGTAATCTGAAAGAGATGGCTGATGCCCGGTGGTCTGCTGCAAAAATATCCCCTCCATTTCCCTTCTCTGTTTTCTAA 1224 0.5033 MSSCFRPSLPTNDGASPPPPPLSTNTNLTTYLYHTEAGVVSLTWSRSIIGRSLHLHLHHPPYDSPLPPPTSITPASFHLHIKPFVFWKKHGTKKLSDNALIFWNLSRAKFGSGPEPHSGFYVALVVDKEMILVVGDLNKDAYAKTKACEPKNSQLLVLKREHMVANKIYSTRAKFGGRMREIQIDCGYRDDSRLCFSVDGKVVLQIKRLKWKFRGNERVEVDGVPVQISWDVYNWLFERENGDGHAIFMFKIEEEDEEGGKEVAGDRNLMNLWTQQNWHLGPNEWGRIGKSFSSSSVSVSSSAGSFGGSSSVMEWSSVEENELVVPIGFSLLVYAWKRIVLREKRNHGIVSLPVVEFYSREGLSSLVVLLAVTVMNQEFGWPCNLKEMADARWSAAKISPPFPFSVF 407
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g0654 407 Pfam Plant protein of unknown function (DUF868) 26 337 IPR008586 -
Lele02g0654 407 MobiDBLite consensus disorder prediction 1 22 - -
Lele02g0654 407 PANTHER EXPRESSED PROTEIN 3 337 IPR008586 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g0654 Lele-ChrLele02 3913760 3915548 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g0654 27 258 EF-hand Containing Proteins AT5G28150 36.777 3.22e-50 169
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0658 28 4200494 4202478 Lele02g0654 02 3913760 3915548 CCT
Lele02g0654 02 3913760 3915548 Lele03g0668 03 3922548 3923564 hybridization
Lele02g0654 02 3913760 3915548 Lele04g0672 04 4058915 4059931 hybridization