Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0643 ATGCTCCAATTAGCTCTTGTTTGTGGATTCGCAGCTGTGAGCGATGAAGGAAGGTGGAATGATTTGAATCGAGAAGCCAGTAATGTGAGATCTGAACGAAGAGGAGAGGAAGCTCCACCCTCCGGAACACCAAATTGTTCTGTTTCGCGATGTTTTGGGAAAGAGCTAACTTATACTAAGGAGGCTATGATCCTATGCGTGCTTTTGGTGTTGTTCAATAAGGCAGCTCTCTCATCTTATGCCTTCCCATCTGCTAGTTTCATCACGCTTCTTCAGATGGTATGCTCTTGTTGCTTGCTCTATGTGTTAAAGCGCTGGAAGATAATTTCCTTCAGAGCAGGTGAATCTTTGACTTCATCTGATACAACAACAAAATTTGTATCACTGAAGACTTTGAGGCACACTCTTCCTTTGGCTGGGACATATTTATTTTACATGATAGTCACCATGGAGTCTGCTCGTGGGGTAAATGTTCCAATGTATACCACCCTTCGGAGAACCACAGTGGTGTTTATGATGCTTATGGAGTATATCCTGGCAGGGCAGAGGTACACATCCTCTGTTGTTTTAAGTGTTGGCCTGATTGTCTTTGGTGCATTTGTTGCTGGAGCACGGGACTTGTCTTTCGATGCTAATGGCTATGCCGTTGAAAAACCAGTGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATGGATTTGTTTACCATTGGCCTTGGCTGGATACTTTTTGGTGGGCTACCATTCGATGCCTGGAATGTTGTTGGACAACTTCTTGGTTTTGCTGGTTCTGGATTATACGCTTACTACAAGCTAATTGGCAAATAA 825 0.4364 MLQLALVCGFAAVSDEGRWNDLNREASNVRSERRGEEAPPSGTPNCSVSRCFGKELTYTKEAMILCVLLVLFNKAALSSYAFPSASFITLLQMVCSCCLLYVLKRWKIISFRAGESLTSSDTTTKFVSLKTLRHTLPLAGTYLFYMIVTMESARGVNVPMYTTLRRTTVVFMMLMEYILAGQRYTSSVVLSVGLIVFGAFVAGARDLSFDANGYAVEKPVVLIALALCGAMDLFTIGLGWILFGGLPFDAWNVVGQLLGFAGSGLYAYYKLIGK 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0643 274 Pfam Triose-phosphate Transporter family 67 214 IPR004853 -
Lele03g0643 274 PANTHER SOLUTE CARRIER FAMILY 35 63 216 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0643 Lele-ChrLele03 3774133 3778156 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele03g0643 69 215 Organic Solute Cotransporters AT2G13650 28.571 2.30e-09 55.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0631 28 4021626 4028849 Lele03g0643 03 3774133 3778156 CCT
Lele26g0647 26 4103973 4110377 Lele03g0643 03 3774133 3778156 CCT
Lele27g1453 27 20683580 20687124 Lele03g0643 03 3774133 3778156 CCT
Lele01g0644 01 3767296 3771825 Lele03g0643 03 3774133 3778156 hybridization
Lele02g0630 02 3768407 3773641 Lele03g0643 03 3774133 3778156 hybridization