Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele26g0647 ATGCTAGCCCTAGAGTTGGCATTCATTACTGCAGACATACCCCGTACAACTCACTCGCACACTTCATCAGACACCTTGTGGGCAGGAGTGGGTGAAAAATTCAAAACCTGGTTCTACCCTTCAAAATACTCATTCGATAAGATTACACAGACGTCAACATCGATTTTCAATAGCCGAAAGAAATGGGAGGGGGGCAATTTTTTTCCAACCATCAAGAATGATGATGGGGCCCCACACTCAAAGGGGAAGCGATATGCATCATCCCAAGCACCTGTAGGAGTAAAAAGAGACTTACTTGGCTTTGATGATGAAGATAACACTGGCCCATTTTTGTTCAAAGCGCTTGTCCAATTTATGTCTCGACATGCATCCTTATCAATCCAACCAACCATATGTCTATATGCCAGTACGGGATATTTCCAGTTTGGTGCATACGTTGGCATAAAGCGTCTAAGCACGCAGCTTGCGAGTCCCGAGTCACAACTCGCCTCCGAGTTTATGATTGGGTATTTCCTCCGGATCACGTCAAATCGCCAAGAAATGTCTCTAAGACCGTCCGCTTCGTTGGAGAATCTGACACTTCCGGTATCGGATACTCCAAAGGACCAAGATGGAAAGGCGCTTTTAATGGCTGATGAGAAGCTCTTTAAAGGTTCTGCTATGACCAGACGTGGAGCCTACGCTGCTCTTTCCTACATGTCATGCGCAGTGCTCTTGGTGATGTTCAATAAGGCAGCTCTTTCATCTTACAACTTCCCATCTGCAAATGTCATCACATTTCTTCAGATGGTATGTTCTTGTTCTTTTTTGTATTTATTGAGGAGGTGGAAGATAATCTCTTTCACAGCAGGTGATTCTTTGATTTCATATGACAACTCAACAAAATTTGTACCATTGAAGACTTTGAAGCACACCCTTCCTCTATCGGGAACATATTTATTTTACATGCTAGTCACCATGGAATCTGTTCGTGGAGTAAATGTTCCAATGTACGCCACCCTTAGGAGGACAACAGTAGTATTTACAATGATTGTTGAGTATATTCTGGTTGGGCAGAGATATACATCGTCTGTCATTTTCAGTGTTGGCTTGATTGCTTTTGGGGCTTTTGTTGCGGGAGTGCGAGACTTGTCATTTGATGCTTATGGTTATTCGATTGTTTTCATGGCAAACATCAGCACAGCAATATATCTTGCCACCATTGCCCGTGTTGGAAAAACCAGTGGGCTTAATAGCTGTGGCCTCATGTGGTGCAACAGTATCGTATGTGGACCAGTTTTGCTAATTTGGACACTAGTTCAGGGCGACTTGAAGATGGCAATCAATTTTCCTTATATTTTTTCTCCAGGTTTTGTGGTTGTTTTGCTTTGTTCCTGCATACTGGCTTTCTTCTTGAATTACAGTATTTTTCTGAACACAACTCTAAATTCAGCTCTTACTCAGACAATCTGTGGTAGTTTGAAGGATCTATTCACTATTGGCCTGGGCTGGATATTATTTGGAGGACTACCGTTTGATTTTTGGAATGTAGTTGGGCAACTTCTCGGCTTCATTGGTTCTCTTTTATATGCCTACTATAAGCTGGTGGGCAAATAG 1596 0.4261 MLALELAFITADIPRTTHSHTSSDTLWAGVGEKFKTWFYPSKYSFDKITQTSTSIFNSRKKWEGGNFFPTIKNDDGAPHSKGKRYASSQAPVGVKRDLLGFDDEDNTGPFLFKALVQFMSRHASLSIQPTICLYASTGYFQFGAYVGIKRLSTQLASPESQLASEFMIGYFLRITSNRQEMSLRPSASLENLTLPVSDTPKDQDGKALLMADEKLFKGSAMTRRGAYAALSYMSCAVLLVMFNKAALSSYNFPSANVITFLQMVCSCSFLYLLRRWKIISFTAGDSLISYDNSTKFVPLKTLKHTLPLSGTYLFYMLVTMESVRGVNVPMYATLRRTTVVFTMIVEYILVGQRYTSSVIFSVGLIAFGAFVAGVRDLSFDAYGYSIVFMANISTAIYLATIARVGKTSGLNSCGLMWCNSIVCGPVLLIWTLVQGDLKMAINFPYIFSPGFVVVLLCSCILAFFLNYSIFLNTTLNSALTQTICGSLKDLFTIGLGWILFGGLPFDFWNVVGQLLGFIGSLLYAYYKLVGK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele26g0647 531 Pfam Triose-phosphate Transporter family 235 523 IPR004853 -
Lele26g0647 531 PANTHER SOLUTE CARRIER FAMILY 35 226 527 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele26g0647 Lele-ChrLele26 4103973 4110377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele26g0647 203 408 Organic Solute Cotransporters AT2G13650 26.923 4.27e-10 58.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g0647 26 4103973 4110377 Lele01g0644 01 3767296 3771825 CCT
Lele26g0647 26 4103973 4110377 Lele02g0630 02 3768407 3773641 CCT
Lele26g0647 26 4103973 4110377 Lele03g0643 03 3774133 3778156 CCT
Lele26g0647 26 4103973 4110377 Lele04g0650 04 3909259 3913578 CCT
Lele26g0647 26 4103973 4110377 Lele27g1453 27 20683580 20687124 hybridization