Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0644 ATGTCTCTGGAGCCGTCCGATTCGACACAGAGCATGGCACTGCCGGTTTCGGATCCTCAAAAGGATCAGGATGGAGGGAAGCTCTTCAAGGGTGACGAGACACTTTTCAATGGTTCCGCCATGACTAAACGAGGAGCCTACGCTGCATTCTCTTACATGTCCTGCGCTGTGCTTTTGGTGTTGTTCAATAAGGCAGCTCTCTCATCTTATGCCTTTCCATCTGCAAGTTTCATCACGCTTCTTCAGATGTTATGCTCTTGTTGCTTGCTCTATGTATTGAAGTGCTGGAAGATAATTTCCTTCAGAGCAGGTGAATCTTTGACTTCATCTGATACAACAACAAAATTTGTATCACTGAAGACTTTGAGGCACACTCTTCCTTTGGCTGGGACATATTTATTTTACTTGATAGTCACCATGGAGTCTGTTCGTGGGGTAAATGTTCCAATGTATACCACCCTTCGGAGAACCACAGTGGTGTTTACGATGCTTATGGAGTATATCCTGGCAGGGCAGAGGTATACATCCTCTGTTGTTTTCAGTGTTGGCCTGATTGTCTTTGGTGCATTTGTTGCTGGAGCACGGGACTTGTCTTTCGATGCTTATAGCTATGCTGTTGTTTTTATGTCAAACATTAGCACAGCAATATATCTCGCAACCATAGCCCGTGTAGGAAAAACCAGTGGTCTTAATAGCTTTGGCCTTATGTGGTGCAATGGTATAATATGTGGACCAGTTTTGCTTATTTGGACATTAATTCGGGGTGACATGAAGATGGCAATCAATTTCCCTTATCTGTTTTCACCTGGATTCATTGTCGTGTTGATTTTTTCCTGTGTATTGGCTTTCTTCTTGAATTACAGTATTTTTTTGAACACAACTCTAAATTCCGCCCTGACACAGACAATTTGTGGTAATTTGAAGGATTTGTTTACCATTGGCCTTGGCTGGATACTTTTTGGTGGGCTACCATTCGATGCCGTGAGTGCTCTATTCTTTTCTGATCAACATTCTCTTGCTAGCTGGGTGTATTCTGCTGTTATATTTTTTTATGTTCTGTCATATGATAGTTTATGTACCGTTTGGTTGCAGTGGAATGTTGTTGGACAACTTCTCGGTTTTGCTGGTTCTGGATTATACGCTTACTATAAGCTGATTGGCAAATAA 1167 0.4207 MSLEPSDSTQSMALPVSDPQKDQDGGKLFKGDETLFNGSAMTKRGAYAAFSYMSCAVLLVLFNKAALSSYAFPSASFITLLQMLCSCCLLYVLKCWKIISFRAGESLTSSDTTTKFVSLKTLRHTLPLAGTYLFYLIVTMESVRGVNVPMYTTLRRTTVVFTMLMEYILAGQRYTSSVVFSVGLIVFGAFVAGARDLSFDAYSYAVVFMSNISTAIYLATIARVGKTSGLNSFGLMWCNGIICGPVLLIWTLIRGDMKMAINFPYLFSPGFIVVLIFSCVLAFFLNYSIFLNTTLNSALTQTICGNLKDLFTIGLGWILFGGLPFDAVSALFFSDQHSLASWVYSAVIFFYVLSYDSLCTVWLQWNVVGQLLGFAGSGLYAYYKLIGK 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0644 388 MobiDBLite consensus disorder prediction 1 24 - -
Lele01g0644 388 Pfam Triose-phosphate Transporter family 55 321 IPR004853 -
Lele01g0644 388 PANTHER SOLUTE CARRIER FAMILY 35 46 384 - -
Lele01g0644 388 MobiDBLite consensus disorder prediction 1 17 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0644 Lele-ChrLele01 3767296 3771825 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g0644 22 288 Organic Solute Cotransporters AT2G13650 25.362 1.15e-13 68.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0631 28 4021626 4028849 Lele01g0644 01 3767296 3771825 CCT
Lele26g0647 26 4103973 4110377 Lele01g0644 01 3767296 3771825 CCT
Lele27g1453 27 20683580 20687124 Lele01g0644 01 3767296 3771825 CCT
Lele01g0644 01 3767296 3771825 Lele03g0643 03 3774133 3778156 hybridization
Lele01g0644 01 3767296 3771825 Lele04g0650 04 3909259 3913578 hybridization