Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele02g1590 ATGCAGATGGATAGGGCTGAGAGTCATGTTCCCTTGTTTGAGACGCAGACACCTAAAGGAAGGGTCATCATCTACAGGCTCTTCTCCGTCTCATTATTCGCCGGAATATTCTCCATCTGGGCTTACAGATTCTCTCACTTGTTCATCCATGGCGGCGGTGATGATGAGATCAACAAGTCTTCTTGGTGGGTCGTGTGGGTTGCTTTGTTTGTGGCAGAGCTATGGTTCGGCTTCTACTGGATCCTCACTCAAGCCCTCCGATGGAACCTTGTCTTCCGACGTCCCTTCAACCACCGTCTCTCTCAGAGATACGAACAAAGCTTGCCAAGGGTGGACGTGTTTGTGTGTACGGCGGACCCAGAGATAGAGCCACCGATGATGGTGATGAACACTGTGTTATCAGTTATGGCCTATGACTATCCCTCCGACAAGCTCAGTGTTTATCTCTCCGACGACGCTGCCTCAGAGATCACCTTCTACGCTTTACTTGAAGCTTCTTCTTTCGCTAAGCACTGGCTTCCCTTCTGCAAGAGATTCCACGTCCAACCCACTTCTCCTTCTGCTTATTTCAACACTTCTTCACATGACACGGTTCCCACCAAAGATTTGGCAGATATTAAGAAACTATATCAAGATATGGAAAGACGAATCGAGGATGCGACCAAGTCGGGACAAGTGCCTAGAGATGTACGTTCAAAGCACAAGGGATTCTCTCAGTGGGATTCATACTCTTCTCGACGTGACCATGATACAATTATTCAGCAGATATTACTTCACAGGAAAGATGCAGAGAATTCGAAAGATGTAGATGGATGTGTTATTCCAAGTCTAGTCTACTTGGCTCGCGAGAAAAGACCCCAACATCCCCATCATTTTAAAGCTGGAGCCATGAATTCATTGATAAGGGTGTCTTCAAAGATTAGCAACGGCAAGATCATAATGAATGTGGACTGTGACATGTACTCCAACAATTCAGCATCAGTGAGAAGTGCACTGTGCTTCTTCATGGATGAAGAGAAAGGCCATGAAGTAGCTTATGTGCAGTTCCCGCAGAACTTCGTGGGTGTCACCAAGAATGACTTATACGGGAGTGATCTGCGAGTGATTTCTGAGCTGGAATTTCATGGTGCCGATGGTTGTGGTGGTCCATTGTACATTGGGTCGGGCTGCTTTCACAGGAGAGACGTTCTTTGTGGGAGGAAGTTCAGTGATCAACACAAGTTTAATGACTGGAACAGCGAGGATGACCCATTCATAATGGAAGCAAGCTTGCAGAAACAAGAACAAGACTCAAAGCTTCTTGCTAGCTGCACCTATGAACAAAACACACTCTGGGGAACAGAGATGGGGCTGCTATATGGGTGTGCGGTGGAGGATGTGATAACAGGATTATCAATACAGAGCAAAGGGTGGAAGTCAGTCTATTACAATCCAGAGAGGAAGGCATTCTTAGGGGTGGCTCCAAACACATTGGGGCAAACACTGGTGCAGCACAAGAGATGGTCAGAGGGTGAACTTCAGATTCTGTTTTCAAAGTACAGTCCTGCTTCGTATGATGGTTATGGCAAAATCAGTTTGGGCCTTCAAATGCTGTACTTTTGCTATAACTTATGGGCAGTTAACAGTTTGGCCACACTCTATTTCTCCATTGTCCCTTCTCTTTGCCTCCTTCAAGGAATTCCCTTGTCTCCAAAGATATCAAGCCCATGGTTCATACCTTTCGCATATGTAATAGTTGCGGAAGCCGCTTACAGCTTGTTTGAGTTTTTGAGCTGTGGAGGCACAGTGAAGGGTTGGTGGAACGAGCAAAGGATTTGGCTCTACAAGAGAACAAGCTCTTACTTCTTTGCTCTCGTGGATACCACATTGAAGCTTCTAGGGTTTCCTTCTGATTCAGGCTTCATAATCACATCTAAAGTTGCAGAAGAAGAGGTTTCTCAGCGCTACAAGGAAGAAGTTATGGAGTTTGGAGCCTCTTCGTCCATGTTCACTCTGTTAGCAACACTTGCTATGCTTAATCTGTTTTGCTTTCTTGGCGTATCAATGGAAGCTCTTATAAATGAAGGTAGCTTTATTAGGGTTTTGGAGAAGATGACCTTGCAAGTTACATTATGTGGGGTTCTTGTTCTCATCAATGTCCCAATATACAGAGGACTTTTCTTTAGGAAGGACAAGGGAAGATTACCAACCTCCGTTGCCGTTAAATCTACAATATTTGCTTTAAGTGTATGTGTTCTCTTCAAAGCCTTAGCATTCAACTTAGGTTCTTAA 2271 0.4505 MQMDRAESHVPLFETQTPKGRVIIYRLFSVSLFAGIFSIWAYRFSHLFIHGGGDDEINKSSWWVVWVALFVAELWFGFYWILTQALRWNLVFRRPFNHRLSQRYEQSLPRVDVFVCTADPEIEPPMMVMNTVLSVMAYDYPSDKLSVYLSDDAASEITFYALLEASSFAKHWLPFCKRFHVQPTSPSAYFNTSSHDTVPTKDLADIKKLYQDMERRIEDATKSGQVPRDVRSKHKGFSQWDSYSSRRDHDTIIQQILLHRKDAENSKDVDGCVIPSLVYLAREKRPQHPHHFKAGAMNSLIRVSSKISNGKIIMNVDCDMYSNNSASVRSALCFFMDEEKGHEVAYVQFPQNFVGVTKNDLYGSDLRVISELEFHGADGCGGPLYIGSGCFHRRDVLCGRKFSDQHKFNDWNSEDDPFIMEASLQKQEQDSKLLASCTYEQNTLWGTEMGLLYGCAVEDVITGLSIQSKGWKSVYYNPERKAFLGVAPNTLGQTLVQHKRWSEGELQILFSKYSPASYDGYGKISLGLQMLYFCYNLWAVNSLATLYFSIVPSLCLLQGIPLSPKISSPWFIPFAYVIVAEAAYSLFEFLSCGGTVKGWWNEQRIWLYKRTSSYFFALVDTTLKLLGFPSDSGFIITSKVAEEEVSQRYKEEVMEFGASSSMFTLLATLAMLNLFCFLGVSMEALINEGSFIRVLEKMTLQVTLCGVLVLINVPIYRGLFFRKDKGRLPTSVAVKSTIFALSVCVLFKALAFNLGS 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele02g1590 756 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 242 419 IPR029044 -
Lele02g1590 756 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 101 187 IPR029044 -
Lele02g1590 756 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 11 738 - -
Lele02g1590 756 SUPERFAMILY Nucleotide-diphospho-sugar transferases 112 535 IPR029044 -
Lele02g1590 756 Pfam Cellulose synthase 434 749 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele02g1590 756 Pfam Cellulose synthase 111 413 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele02g1590 756 Coils Coil 203 223 - -
Lele02g1590 756 FunFam Cellulose synthase isolog 101 198 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele02g1590 Lele-ChrLele02 19789841 19795113 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele02g1590 11 750 Glycosyltransferase AT1G55850 56.005 0.0 817
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1730 26 20838792 20856134 Lele02g1590 02 19789841 19795113 CCT
Lele28g1738 28 20250619 20267963 Lele02g1590 02 19789841 19795113 CCT
Lele02g1590 02 19789841 19795113 Lele03g1331 03 8029483 8035585 hybridization
Lele02g1590 02 19789841 19795113 Lele04g1580 04 20667047 20671315 hybridization