Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g1317 ATGCTTGCCAAGGGTGGACAAGTACCCAGAGACGTACGTTCAAAGCACAAGGGATTTTCTCAATGGGATTCTTATTCCTCACGACGTGACCATGATACAATTCTTCAGATATTACTTCACAGAAAAGATGCACAGAATTCGAAAGACATAGATGGGTGTGTTATGCCAACTCTGGTGTACTTGGCTCGTGAGAAGAGACCCCAACATCCCCATCATTTTAAAGCTGGAGCCATGAATTCACTGATAAGGGTGTCTTCAAAGATTAGCAACGGCAAAATCATAATGAATGTGGACTGTGATATGTACTCCAACAATTCAGAATCAGTGAGAAGTGCACTGTGCTTCTTAATGGATGAAGTGAAAGGCCATGAGATAGCTTATGTGCAGTTCCGACAGAATTTCGTGGGTGTAACCAAGAATGACTTATACGGCAGTGATCTACGAGTCATTTCTGAGCTGGAATTTCATGGTGCCGACGGTTGTGGTGGCCCACTGTACATTGGATCAGGCTGCTTTCACAGGAGAGACGTTCTTTGCGGGAAGAAGTTCAGCAATCAACACAAAGTTAATGACTGGAACAGTGAGGATGACCCATTCATAGTGGAAGCAAGCTTGCAGAAACAAGAACAAGAATCAACGCCTCTTGCTAGCTGCACCTATGAACAAAACACACTATGGGGAAAAGAGATGGGGCTGCTATATGGGTGTGCAGTGGAGGATGTGATAACAGGGTTATCAATACAGAGCAAAGGATGGAAGTCAGTGTATTACAATCCAGAGAGGAAGGCATTCTTAGGGTTGGCTCCAAACACATTAGGGCAAACACTGGTGCAGCACAAGAGATGGTCAGAGGGTCAACTTCAGATTATGATCTCAAAATATAGTCCTGCTTGGTATGGTTATGGCAAAATCAGTTTGGGCCTTCAAATGCTGTACTGTGTCTATGATTTATGGGCAGCTAACAGTTTGGCCACACTCTATTTCTCCATTGTCCCTTCTCTTTGCCTCCTTAAGGGCGTTCCCTTGTTTCCAAAGATGTCAAGCCGATGGTTCATACCTTTCGCATATGTAATAGTTGCGGAAACCACTTACAGCTTGTTTGAGTTTTTGGGCTGTGGAGGCACATTCAAAGGTTGGTGGAACGAGCAAAGGATTTGGCTCTACAAGAGAACAAGCTCTTACTTCTTTGCTTTCATGGATACCACCTTGAAGCTTCTAGGGTTTCCTTCAGATTCAGGCTTCATAATCACATCCAAAGTTGCAGAAGAAGAAGTCTCACAGCGCTACGAGGAAGAGATTATGGAATTTGGAGCCTCTTCTTCTATGTTCACTCTCTTAGCAACACTTGCTATGCTCAATCTGTTTTGCTTTCTTGGAGTATCAATGGAAGCTCTTATAAGTGAAGGTGGCTTTATTAGGGTTTTGGAGAAGATGATGTCGCAAGTTATATTAGGTGGGGTTCTAGTTCTCATCAATGTCCCAATATACAAAGGACTTTTCTTTAGGAAGGACAAGGGAAGATTACCAACTTCCGTTGCCATTAAATCTACAATATTTGCTTTAAGTGCATGTGTTGTCTTCAAGGCCTTGCACTAA 1596 0.4311 MLAKGGQVPRDVRSKHKGFSQWDSYSSRRDHDTILQILLHRKDAQNSKDIDGCVMPTLVYLAREKRPQHPHHFKAGAMNSLIRVSSKISNGKIIMNVDCDMYSNNSESVRSALCFLMDEVKGHEIAYVQFRQNFVGVTKNDLYGSDLRVISELEFHGADGCGGPLYIGSGCFHRRDVLCGKKFSNQHKVNDWNSEDDPFIVEASLQKQEQESTPLASCTYEQNTLWGKEMGLLYGCAVEDVITGLSIQSKGWKSVYYNPERKAFLGLAPNTLGQTLVQHKRWSEGQLQIMISKYSPAWYGYGKISLGLQMLYCVYDLWAANSLATLYFSIVPSLCLLKGVPLFPKMSSRWFIPFAYVIVAETTYSLFEFLGCGGTFKGWWNEQRIWLYKRTSSYFFAFMDTTLKLLGFPSDSGFIITSKVAEEEVSQRYEEEIMEFGASSSMFTLLATLAMLNLFCFLGVSMEALISEGGFIRVLEKMMSQVILGGVLVLINVPIYKGLFFRKDKGRLPTSVAIKSTIFALSACVVFKALH 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g1317 531 PANTHER X-BOX TRANSCRIPTION FACTOR-RELATED 21 518 - -
Lele01g1317 531 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 26 197 IPR029044 -
Lele01g1317 531 Pfam Cellulose synthase 20 194 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele01g1317 531 Pfam Cellulose synthase 210 527 IPR005150 GO:0016020|GO:0016760|GO:0030244
Lele01g1317 531 SUPERFAMILY Nucleotide-diphospho-sugar transferases 69 318 IPR029044 -
Lele01g1317 531 MobiDBLite consensus disorder prediction 1 23 - -
Lele01g1317 531 MobiDBLite consensus disorder prediction 9 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g1317 Lele-ChrLele01 8041954 8046214 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele01g1317 3 530 Glycosyltransferase AT1G55850 58.601 0.0 613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1730 26 20838792 20856134 Lele01g1317 01 8041954 8046214 CCT
Lele28g1738 28 20250619 20267963 Lele01g1317 01 8041954 8046214 CCT
Lele01g1317 01 8041954 8046214 Lele03g1331 03 8029483 8035585 hybridization
Lele01g1317 01 8041954 8046214 Lele04g1580 04 20667047 20671315 hybridization