Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele01g0682 ATGATGTTTCGATTTGGGATGTTGCTTTTTGTGTTGGTGATTTCTGCTGCGACAACACCCAGAATGGAAGCGGCAGCAGGAGATTCGAATAATTCTGAGTACACTTTGGATTCAGTGAGGAAGGCTTTGGAAAAACAAGAGGATACCATAATTTTCAATCTCATCGACAGAGCTAAGTTCCCTCTCAATTCTAACACTTACGATCAACATTACTTCACCATTCTCGACATCCTCGTTAAGAACACCGAGGCCATTCAAGCAAAGATTCTGCATCCTGGAGCCGCTTCAGTCAACATAAACAAGTCCATCTGGAATGTTTATTTTCATGAGGCCATCTCTAGAAGGATTCACTACGGAAAGTTCGTGGCAGAGGTTAAATTCAGGGAATCCCCTCAGGAGTATGAGCCTTTAATACGTGCTCAGCACAAAGAAGGATTGATGAAATTGTTGACAGCGGAGAGAGTAGAAGAGATGGTGAGGAAGAGGGTTGAAAAGAAGGCAATGGTTTTCGGGCAAGACGTGGGCCTTGAGCGTGACGATGATGATGACAAGCCTAATTACAAGGTCAACCCTTCCCTAGCTTCCAGCCTCTACCAGAAATGGATTATCCCTCTTACCAAGGATGTTGAGGTCGAATACCTTCTACGCCGTCTCGATTGA 660 0.4455 MMFRFGMLLFVLVISAATTPRMEAAAGDSNNSEYTLDSVRKALEKQEDTIIFNLIDRAKFPLNSNTYDQHYFTILDILVKNTEAIQAKILHPGAASVNINKSIWNVYFHEAISRRIHYGKFVAEVKFRESPQEYEPLIRAQHKEGLMKLLTAERVEEMVRKRVEKKAMVFGQDVGLERDDDDDKPNYKVNPSLASSLYQKWIIPLTKDVEVEYLLRRLD 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele01g0682 219 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 27 91 IPR037039 GO:0004106|GO:0009073
Lele01g0682 219 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 108 219 IPR037039 GO:0004106|GO:0009073
Lele01g0682 219 ProSiteProfiles Chorismate mutase domain profile. 27 219 IPR008238 GO:0004106|GO:0009073
Lele01g0682 219 SUPERFAMILY Chorismate mutase II 31 219 IPR036263 GO:0046417
Lele01g0682 219 PANTHER CHORISMATE MUTASE 26 89 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele01g0682 Lele-ChrLele01 4014294 4015518 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0676 28 4335055 4339336 Lele01g0682 01 4014294 4015518 CCT
Lele01g0682 01 4014294 4015518 Lele01g0682 01 4014294 4015518 ECH
Lele01g0682 01 4014294 4015518 Lele03g0677 03 4017064 4018286 hybridization
Lele01g0682 01 4014294 4015518 Lele04g0684 04 4165358 4166613 hybridization