Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele03g0677 ATGATGTTTCGATTTGGAATGTTGCTTCTTGTGTTGGTGACTTCTCCTGCGACGACGCCCAGAATGGAAGCGGTAGCAGGAGATGCGAATAATTCTGAGTACACTTTGGATTCAGTGAGGAAGGCTTTGGAAAGACAAGAGGATACCATCATTTTCAATCTCATCGACAGAGCTAAGTTCCCTCTCAATTCTAACACTTACGATCAACATTACTTCACCATTCTCGACTTCCTCGTTAAGAACACCGAGGCCATTCAGGCAAAGGCAGGTAGATACCAAAGCCCCGAAGAGAATCCCTTCTTCCCAGAATATTTACCACACTCACTCTTGCCTGATTACCCCTTCTCAAAGATTTTGCATCCTGGAGCCGCTTCAGTCAACATAAACAAGTCTATCTGGAATGTTTATTTTCATGAGGTGCTTCCGCTGCTCGTTGTTTCCGGTGATGATGGTAACTACGCACAAACCGCAGCTAGTGATCTTTCCTTGTTGCAGGCCATCTCTAGAAGGATTCACTACGGAAAGTTTGTGGCAGAGGTTAAATTCAGGGAATCCCCTCAGGAGTATGAGCCTTTAATTCGTGCTCAGCACAAAGAAGGATTGATGAAATTGTTGACAGCGGAGAGAGTAGAAGAGATGGTGAGGAAGAGGGTTGAAAAGAAGGCAATGGTGTTCGGGCAAGACGTGGGCCTTGAGCGTGACGATGATGATGACAAGCCAAACTACAAGGTCAACCCTTCCCTAGTTTCGAGCCTCTACCAGAAATGGATTATCCCTCTTTCCAAGGATGTTGAGGTCGACTACCTTCTACGCCGTCTCGATTGA 825 0.4606 MMFRFGMLLLVLVTSPATTPRMEAVAGDANNSEYTLDSVRKALERQEDTIIFNLIDRAKFPLNSNTYDQHYFTILDFLVKNTEAIQAKAGRYQSPEENPFFPEYLPHSLLPDYPFSKILHPGAASVNINKSIWNVYFHEVLPLLVVSGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQEYEPLIRAQHKEGLMKLLTAERVEEMVRKRVEKKAMVFGQDVGLERDDDDDKPNYKVNPSLVSSLYQKWIIPLSKDVEVDYLLRRLD 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele03g0677 274 Coils Coil 266 274 - -
Lele03g0677 274 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 27 274 IPR037039 GO:0004106|GO:0009073
Lele03g0677 274 PANTHER CHORISMATE MUTASE 27 274 IPR008238 GO:0004106|GO:0009073
Lele03g0677 274 ProSiteProfiles Chorismate mutase domain profile. 27 274 IPR008238 GO:0004106|GO:0009073
Lele03g0677 274 FunFam Chorismate mutase 28 274 - -
Lele03g0677 274 SUPERFAMILY Chorismate mutase II 32 274 IPR036263 GO:0046417
Lele03g0677 274 TIGRFAM CM_pl-yst: chorismate mutase 35 274 IPR008238 GO:0004106|GO:0009073
Lele03g0677 274 PIRSF Chor_mut_AroQ_eu 22 274 IPR008238 GO:0004106|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele03g0677 Lele-ChrLele03 4017064 4018286 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0676 28 4335055 4339336 Lele03g0677 03 4017064 4018286 CCT
Lele03g0677 03 4017064 4018286 Lele03g0677 03 4017064 4018286 ECH
Lele01g0682 01 4014294 4015518 Lele03g0677 03 4017064 4018286 hybridization
Lele02g0670 02 4027880 4029129 Lele03g0677 03 4017064 4018286 hybridization