Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele04g0684 ATGACGTTTCGATTTGAAATGTTGCTTCTTCTGTTGGTGGTTTCTTCTGCTGCAACGCCCAGATCAATGGAAGCGGCCGCAGCAGATTCGAATTCAAAGTACACTCTGGAATCAGTGAGGAAGGCTTTGGAAAGACAAGAGGATACCATCATTTTCAATCTCATCGACAGAGCTAAGTTCCCTCTCAATTCTCCCACCTACCATCAACATTATCACATCCCCATCCTCGACTTCCTCGTTAAGAACACCGAGGCCATTCAAGCAAAGGCAGGAAGATACCAGAGCCCCGAAGAGAATCCCTTCTTCCCAGAATATTTACCACAGTCATTTGTACCTGATTACCCCTCCTCAAAGATTTTGCATCCTGGAGCTGCTTCAGTCAACATAAACAAGTCCATCTGGAATGTTTATTTTCATGAGGTGCTTCCGCCGCTCGCTGCTTCCGGTGATGATGGTAACTACGCACAAACCGCAGCTAGTGATCTTTCCTTACTGCAGGCCATCTCTAGAAGGATTCACTACGGAAAGTTCGTGGCAGAGGTTAAATTCAGGGAATCCCCTCAGGAATACGAGCCTTTAATTCGTGCTCAGGACAAAGAAGGATTGATGAAATTGTTGACAGCGGAGAGAGTAGAAGAGATGGTGAGGAAGAGGGTTGAAAAGAAGGCAATGGTGTTGGGGCAAGATGTGAGCCTTCAGCGTGAGGAAGTCGGTGACAAGACAAATTACAAAGTCAACCCTTCCTTAGTTTCTCGCCTCTACGAGAAATGGCTTATCCCTCTTACCAAGGATGTTGAGGTCGACTACCTTCTTCGCCGTCTCGATTGA 828 0.4662 MTFRFEMLLLLLVVSSAATPRSMEAAAADSNSKYTLESVRKALERQEDTIIFNLIDRAKFPLNSPTYHQHYHIPILDFLVKNTEAIQAKAGRYQSPEENPFFPEYLPQSFVPDYPSSKILHPGAASVNINKSIWNVYFHEVLPPLAASGDDGNYAQTAASDLSLLQAISRRIHYGKFVAEVKFRESPQEYEPLIRAQDKEGLMKLLTAERVEEMVRKRVEKKAMVLGQDVSLQREEVGDKTNYKVNPSLVSRLYEKWLIPLTKDVEVDYLLRRLD 275
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele04g0684 275 FunFam Chorismate mutase 27 275 - -
Lele04g0684 275 Gene3D Chorismate mutase, AroQ class superfamily, eukaryotic 26 275 IPR037039 GO:0004106|GO:0009073
Lele04g0684 275 TIGRFAM CM_pl-yst: chorismate mutase 35 275 IPR008238 GO:0004106|GO:0009073
Lele04g0684 275 ProSiteProfiles Chorismate mutase domain profile. 27 275 IPR008238 GO:0004106|GO:0009073
Lele04g0684 275 PIRSF Chor_mut_AroQ_eu 23 275 IPR008238 GO:0004106|GO:0009073
Lele04g0684 275 PANTHER CHORISMATE MUTASE 16 275 IPR008238 GO:0004106|GO:0009073
Lele04g0684 275 SUPERFAMILY Chorismate mutase II 28 275 IPR036263 GO:0046417
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele04g0684 Lele-ChrLele04 4165358 4166613 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g0676 28 4335055 4339336 Lele04g0684 04 4165358 4166613 CCT
Lele04g0684 04 4165358 4166613 Lele04g0684 04 4165358 4166613 ECH
Lele01g0682 01 4014294 4015518 Lele04g0684 04 4165358 4166613 hybridization
Lele02g0670 02 4027880 4029129 Lele04g0684 04 4165358 4166613 hybridization