Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g1356 ATGGTTTCAGTTGATAATGGGGATTCCAAAGAGGAAATTGAGGAATCTAATGGAAGTAAAGTACAGGAGTTTGATTCCATAGATATTTCAACTTCGAGAAAAACATTGCCAAGCAGTGAAAATCCTCAGGAAAACATGAGTTTTGTTCCTAATAGAATCAAGTTCTTTAATTTTGGCTTTGCTTCTGCCAAATTCAAGCGCCACGCTATTGTGAAGGACCAGATTTCAGAGTTGGCCCCTTCTAGTGGTTCATTAAGAGAGTGCTTAGCTAAGAAACTTAACTGGGATTCACTCAAGAAGGTGTGCATGGAATGGATTAGGGACCCGGTGAACATGGCGCTTTTAGCATGGATCTTGTGTGTTGGTGTTTCAGGTGCAATTCTATTCCTTGTCATGACGGGCATGTTGAATGCTGTGCTGCCAAATAAGTCCACGAGGAATGCGTGGTTTGAAGTAAACAACCAAATACTCAATGCACTATTTACCCTTATGTGTTTGTACCATCATCCTAAGAGGATATACCACCTTGTACTTTTGTCTAGATGGAATCCAGAAGATATCTCTAGACTTAGGAAGGTTTACTGCAAGAATGGAACATATAAGCCCCGAGAATGGGCACACATGGTAGTTGTAGTTATTCTCCTTAATGTGAATTGTTTTGCTCAGTATGCACTCTGTGGTCTAAACTGGGGTTATCGAAGATCTGTACGCCCTCCCATAGGAGTTGGAGTATGCATAGCTTTTTCGTTTGGTGCACCCGCAGTCGCAGGTTTGTATACCATCATTAGCCCCCTCGGAAAAGAATATGATTCTGATATGGATGAAGAAGCGCAGGTTCAAATTTCCAAGGCTCAAAAGAAAGAGCAGCTGAGAGTGAAGTCATTTGAGAGGAGATATTCATTTGCACAAAGAGATCAACAAAGGGTTGTTGAAAGTAAACCACTGTGGAGTGGAGGAATACTTGACCTTTGGGATGATATTTCTCAAGCATACCTATCACTTTTCTGCACTTTTTGTGTGTTCGGTTGGAACATAGAGAGACTCGGATTTGGAAACATGTATGTTCATATTGCGACCTTTATGCTATTCTGCATTGCTCCCTTTTGGATTTTTATCTTGACTGCTGTTAACATTGAGGATGATACTGTTAGGCTAGGTCTAGTAGGTGTTGGGATTGTCCTATGCTTCCTTGGTTTACTGTATGGTGGCTTTTGGAGGATCCAAATAAGAAAGCGGTTCAATTTGCCGGCTTATAACTTCTGTTTTGGCAGGCCTTCAGCTTCTGATTGCACACTTTGGCTATGCTGTTGCTTGTGCTCTCTTGCTCAAGAAGTGAGGACTAGGAATACATATGATATCATAGAAGATGAATTCTCCAGGAAAGAACATGATACCAGCAGTGACAAACTACAAATTTCACCTTCGCCTCGCGAAGATATTGAATCAAACAAATCCGGCTCAAGTTCTCTTTTTGGTAGCAGCTTCCCTTCTATTAGTCCTCAAAGTTCAAAGGGATATCACAGTCCGGGTACGCCACTATCGACTGTCAAAGAAGATAATCCAGAAAGAGATGAAAATGGAATAATGAAGTCACCAACTCCGCCGTTAATACACAGAGAATCTCTTTAG 1629 0.4131 MVSVDNGDSKEEIEESNGSKVQEFDSIDISTSRKTLPSSENPQENMSFVPNRIKFFNFGFASAKFKRHAIVKDQISELAPSSGSLRECLAKKLNWDSLKKVCMEWIRDPVNMALLAWILCVGVSGAILFLVMTGMLNAVLPNKSTRNAWFEVNNQILNALFTLMCLYHHPKRIYHLVLLSRWNPEDISRLRKVYCKNGTYKPREWAHMVVVVILLNVNCFAQYALCGLNWGYRRSVRPPIGVGVCIAFSFGAPAVAGLYTIISPLGKEYDSDMDEEAQVQISKAQKKEQLRVKSFERRYSFAQRDQQRVVESKPLWSGGILDLWDDISQAYLSLFCTFCVFGWNIERLGFGNMYVHIATFMLFCIAPFWIFILTAVNIEDDTVRLGLVGVGIVLCFLGLLYGGFWRIQIRKRFNLPAYNFCFGRPSASDCTLWLCCCLCSLAQEVRTRNTYDIIEDEFSRKEHDTSSDKLQISPSPREDIESNKSGSSSLFGSSFPSISPQSSKGYHSPGTPLSTVKEDNPERDENGIMKSPTPPLIHRESL* 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g1356 542 Pfam PLAC8 family 316 446 IPR006461 -
Lan9g1356 542 MobiDBLite consensus disorder prediction 469 515 - -
Lan9g1356 542 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 538 - -
Lan9g1356 542 MobiDBLite consensus disorder prediction 7 21 - -
Lan9g1356 542 MobiDBLite consensus disorder prediction 462 542 - -
Lan9g1356 542 Pfam Protein of unknown function (DUF2985) 104 182 IPR021369 -
Lan9g1356 542 MobiDBLite consensus disorder prediction 22 45 - -
Lan9g1356 542 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 315 447 IPR006461 -
Lan9g1356 542 MobiDBLite consensus disorder prediction 1 45 - -
Lan9g1356 542 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 538 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g1356 Lan-Chr9 20676635 20678504 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g1356 - - gmx:100795088 785.793
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1165 2 22855112 22857689 Lan9g1356 9 20676635 20678504 LSH
Lan11g0220 11 1405669 1408149 Lan9g1356 9 20676635 20678504 LSH
Lan3g0985 3 21560799 21563675 Lan9g1356 9 20676635 20678504 PCT
Lan9g1356 9 20676635 20678504 Lan3g0985 3 21560799 21563675 PCT