Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g1165 ATGGTTTCGGTTGATATTGGGGATTACAAAGAAGAAATTGAGGAATCTAATGGAAGTAAAGTACCGGAGTTTGCTTCCATTGATATTTCGACTTCGAGAAAAACATTGCTGACTAGTGAAAATCCTCAGGGAAACATAAGTCCTATTCTTAATAGGATCAAGTTCTTTAAATTTGGTTCTGCATCTGCAAAATTCAAGCGCCTTGCTATTGAGAAGGACCAGATTTCACAGTTGGTCCCTTCTAGTGTTTCATTACGAGAGCGCTTAGCTATGAAACTTAACTGGGTTTCGCTCAAGAAAATGTGCATGGAATGGATGAAGGACCCAATGAACATGGCCCTTTTTGCGTGGATCTTATGCGTCGCTGTTTCAGGTGCAATCCTGTTCCTTGTCATGACTGGCATGTTGAATGCTGTGTTGCCGAATAAGTCAACGAGGAATGCGTGGTTTGAAGTAAACAACCAAATACTCAATGCACTGTTTACCCTTATGTGTTTGTACCAGCATCCTCAGAGGATCTACCACCTAGTACTTTTGTCCAGATGGAATCCGGAAGATATCTCTAGACTTAGAAAGGTGTACTGCAAGAATGGAACATATAAGCCTCATGAGTGGGCACACATGATGGTTGTAATTATTCTCCTTAATGTGAATTGTTTTGCTCAATATGCACTCTGTGGTCTAAACTGGGGTTATAAAAGATCCGAACGCCCTTCTGTAGGAGTTGGAATATGCATAGCTTTTGCAATTGGTGCACCTGCAGTCGCAGGTTTATATACCATCATTAGCCCCCTCGGTAAAGATTATGATTCTGATATGGATGAAGAAGCACAGGTTCAAATTTCCGAGGCTCGAAAGAAAGAGCAGTTGAGAGGGAAATCATTTGAGAGGAGATATTCATTTGCACTTAGAGATCAACAAAGGGTTGTTGAAAGTAGACCACAGTGGAGTGGAGGAATACTTGATATTTGGGATGATATTTCTGAAGCATACCTATCACTATTCTGCACTTTTTGTGTGTTTGGTTGGAACATGGAGAGACTCGGGTTTGGAAACATGTATGTTCATATTGCGACTTTTATACTATTCTGCACGGCTCCCTTTTGGATTTTTATATTGGCTGCTGTTAGCATTGAGGATGACACTGTTAGGCAGGCTCTAGTTGGTGTTGGGATTATCTTGTGTTTCTTTGGTTCATTGTATGGTGGCTTTTGGAGGATCCAGATGAGAAAGAGGTACAATTTGCCTGCTTATAATTTCTGTTTCGGTAAACCGGCAGCTTCTGATTGCACACTTTGGCTCTGTTGTTGCTGGTGCTCCCTTGCCCAAGAAGCAAGGACTGGGAATTCTTATGAAATCATAGAAGACAAATTTTTCAGGAAAGAAAATGATACCAATGGTGACAAACTACCGATTTCAACTTTGCCTCGCGAAGATGTTGCATCAAACAAATCTGGCTCAAGTTCTCCGTTAGGTGGAAACCCTGCTTCTATGATCAAACCATCTAGTCCTCTAAGTTCAAGGGGATATTACAGTCCAGGTACGCCACTATCAACTGTCAAAGAAGAGAATTCAGAAAGAGGTCAAGATGGGATAATGAAGCCACCAACTCCGCCATTAATACACAGAGAATCTCTTTAG 1641 0.4132 MVSVDIGDYKEEIEESNGSKVPEFASIDISTSRKTLLTSENPQGNISPILNRIKFFKFGSASAKFKRLAIEKDQISQLVPSSVSLRERLAMKLNWVSLKKMCMEWMKDPMNMALFAWILCVAVSGAILFLVMTGMLNAVLPNKSTRNAWFEVNNQILNALFTLMCLYQHPQRIYHLVLLSRWNPEDISRLRKVYCKNGTYKPHEWAHMMVVIILLNVNCFAQYALCGLNWGYKRSERPSVGVGICIAFAIGAPAVAGLYTIISPLGKDYDSDMDEEAQVQISEARKKEQLRGKSFERRYSFALRDQQRVVESRPQWSGGILDIWDDISEAYLSLFCTFCVFGWNMERLGFGNMYVHIATFILFCTAPFWIFILAAVSIEDDTVRQALVGVGIILCFFGSLYGGFWRIQMRKRYNLPAYNFCFGKPAASDCTLWLCCCWCSLAQEARTGNSYEIIEDKFFRKENDTNGDKLPISTLPREDVASNKSGSSSPLGGNPASMIKPSSPLSSRGYYSPGTPLSTVKEENSERGQDGIMKPPTPPLIHRESL* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g1165 546 MobiDBLite consensus disorder prediction 478 522 - -
Lan2g1165 546 MobiDBLite consensus disorder prediction 469 546 - -
Lan2g1165 546 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 542 - -
Lan2g1165 546 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 315 447 IPR006461 -
Lan2g1165 546 Pfam PLAC8 family 316 446 IPR006461 -
Lan2g1165 546 Pfam Protein of unknown function (DUF2985) 104 182 IPR021369 -
Lan2g1165 546 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 542 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g1165 Lan-Chr2 22855112 22857689 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g1165 - - gmx:100795088 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan2g1165 2 22855112 22857689 Lan11g0220 11 1405669 1408149 LSH
Lan2g1165 2 22855112 22857689 Lan9g1356 9 20676635 20678504 LSH
Lan3g0985 3 21560799 21563675 Lan2g1165 2 22855112 22857689 PCT
Lan2g1165 2 22855112 22857689 Lan3g0985 3 21560799 21563675 PCT