Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0985 ATGGTTTCGGTTGATAACCGGATTGGAAACCTCGAAGATGAAATCGAGGAATCTAATGGAAGTGAAGTAAATGAGTTTGCTTCTGTTCATATTTCAACTTCCAGGAAAACATCTACGAGCGGTGAAAATCCTCAGACGAAATTTCGCGGCTCATCGAATTCTCTTCCTAATAGGATCAACCTGATTAAGTTTGATTCACCATCCGCCAATTTCAAGCGGATTGCTACTGAGAAAGACAAGATTTCACAATCCGTGCCTTCTCCTAGTCCTCAGCCGCATTGCCTAAAAGCAAGCTTCAGTAGCATGTTTGATGAGAAACTTGATTGGGGTAAAGTGAAGAAGATGGGCATGGAATGGATTAGAAACCCAATCAACATTGCCCTTTTTGCATGGATCGTTTGTGTTGGTGTTTCGGGCGCGATTCTGTTCCTTGTCATGACAGGGATGCTGAATTCTGTGCTACCGATAAAATCTGTTAGGAACACATGGTTTGAAGTAAACAACCAAATACTCAATGCATTGTTTACACTTATGTGTTTGTACCAACATCCAAAAAGGTTCCATCACCTTGTTCTTCTGTGTAGATGGAGACCAAGTGACATTTCTACGCTCCGAAAGTTATACTGCAAGAACGGTACTTATAAGCCGCACGAGTGGGCACACATGATGGTAGTGGTTATGCTTCTTCATCTGAATTGTTTTTCTCAATATGCACTTTGCGGTTTAAACTTGGGATATAAAAGATCGGATAGGCCTGCTGTAGGAGTTGGAATATGTATATCTATCTCGATTGCTTCGCCTGCAGTTGCTGGTTTATACACCATTCTTTGCCCACTTGGAAAGGACTACGATTCCGAGATGGACGAGGAAGCACAGGTTCAAATTACTTCAGCTCAAAGGCAAGAGCTGAGACAGAAACCATTTGAGAAGAAATATTCATTTGCAACCAAAGATCGACGAAGGGTTATCGAAAATAGACCAAAGTGGAGTGGTGGAATACTTGACATTTGGGAAGATATTTCTTTGGCATATCTCTCACTTTTCTGCAGCTTTTGTGTCTTTGGGTGGAATATGGAGAGACTCGGCTTCGGAAACATGTATGTTCATATTGCAACTTTCATGTTGTTCTGTATGGCTCCTTTCTGGATATTTATATTGGCTGCTGTTAATATCGATGACGACGATGTTAGACAGCCTCTAATAGCTGTTGGAGTTATTCTTTGTTTTTTCGGTTTGCTTTATGGCGGCTTTTGGCGGATCCTAATGAGAAAGAGGTTTAATTTGCCTGCCTATGATTTCTGTTTTGGTAAACCTTCAGTCTCTGATTGCACACTTTGGCTGTGTTGTTGCTGGTGCTCCCTTGCTCAAGAAGCACGGACCGGGGATCACTACGATCTCGTAGAAGAAAAGGTATGCAGGAAAGACTTTAATTCTACTGACCAACCGTCGATTCGACCTTTGGCTCGGGAAGATGTTGTGTCAACCAAATCCGGCACAAGTCCGGCTATTCCACTATCTACCTTAAAAGAAGAACAATCTCAAAGTGATGAAAATGGAATAATGACTCCACCTATTCCATCATTAATACAAAGAGAAGCTCCTTAG 1605 0.4181 MVSVDNRIGNLEDEIEESNGSEVNEFASVHISTSRKTSTSGENPQTKFRGSSNSLPNRINLIKFDSPSANFKRIATEKDKISQSVPSPSPQPHCLKASFSSMFDEKLDWGKVKKMGMEWIRNPINIALFAWIVCVGVSGAILFLVMTGMLNSVLPIKSVRNTWFEVNNQILNALFTLMCLYQHPKRFHHLVLLCRWRPSDISTLRKLYCKNGTYKPHEWAHMMVVVMLLHLNCFSQYALCGLNLGYKRSDRPAVGVGICISISIASPAVAGLYTILCPLGKDYDSEMDEEAQVQITSAQRQELRQKPFEKKYSFATKDRRRVIENRPKWSGGILDIWEDISLAYLSLFCSFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIDDDDVRQPLIAVGVILCFFGLLYGGFWRILMRKRFNLPAYDFCFGKPSVSDCTLWLCCCWCSLAQEARTGDHYDLVEEKVCRKDFNSTDQPSIRPLAREDVVSTKSGTSPAIPLSTLKEEQSQSDENGIMTPPIPSLIQREAP* 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0985 534 MobiDBLite consensus disorder prediction 490 534 - -
Lan3g0985 534 Pfam PLAC8 family 329 459 IPR006461 -
Lan3g0985 534 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 530 - -
Lan3g0985 534 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 328 460 IPR006461 -
Lan3g0985 534 MobiDBLite consensus disorder prediction 30 54 - -
Lan3g0985 534 MobiDBLite consensus disorder prediction 493 521 - -
Lan3g0985 534 Pfam Protein of unknown function (DUF2985) 118 196 IPR021369 -
Lan3g0985 534 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 530 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0985 Lan-Chr3 21560799 21563675 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0985 - - gmx:100811964 819.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan3g0985 3 21560799 21563675 Lan2g1165 2 22855112 22857689 PCT
Lan3g0985 3 21560799 21563675 Lan11g0220 11 1405669 1408149 PCT
Lan3g0985 3 21560799 21563675 Lan9g1356 9 20676635 20678504 PCT
Lan2g1165 2 22855112 22857689 Lan3g0985 3 21560799 21563675 PCT
Lan11g0220 11 1405669 1408149 Lan3g0985 3 21560799 21563675 PCT
Lan9g1356 9 20676635 20678504 Lan3g0985 3 21560799 21563675 PCT