Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan11g0220 ATGGTTTCAGTTGATAATGGGGATTCCAAAGAAGAAATTGAGGAATCTAATGGAAGTAAAGTACAGGAGTTTGTTTCCATAGATATTTCAACTTCGAGAAAAACATCGCCCATCAATGAAAATCCTCAGGGAAAGTTCCAGGGAACCTCGAATTCTGTTCCTAATAGGATCAACTTCTTTAAATTTGGTTCTGCATCTGCAAAATTCAAGCGCCTTGCCACTGCGAAGGACCAAATTTCACAGCTGGTCCCTTCTACTGGTTCATTAAAAGAGCGCTTAGCTAAGAAACTTAACTGGGATTCGCTTAAGAAGATGTGCATTAAATGGATTCGGGACCCATCCAACATAGCCCTTTTTGCATGGATCTTATGTGTTGCTGTTTCAGGTGCAATTCTGTTCCTTGTCATGACTGGCATGTTGAATAATGTGCTTCGAAAAAAGTCCACGAGGAATGCGTGGTTCGAAGTAAACAACCAAATACTCAATGCACTCTTTACCCTTATGTGTTTGTACCAGCATCCTAAGAGGATCTACCACCTTGTACTTTTGTGCAGATGGAATCCAGATGATATCTCGAGACTTAGAAATCTGTACTGCAAGAATGGAACATATAAGCCCCATGAGTGGGCACACATGATGGTCGTAGTTATTCTCCTTAATGTGAATTGTTTTGCTCAATATGCTCTCTGTGGTCTAAACTGGGGTTATAAAAGATCGGAACGCCCTCCCATAGGAGTTGGAATATGCATAGCTTTTGCAATTGGTGCACCTGCATTTGCAGGTTTATATACCATCATTAGTCCCCTTGGTAAAGATTATGATTCTGATATGGATGAAGAAGCTCAGAATCAAATTTCCGAGGCTCGAAAGAAAGAGCAGTTGAGAGTGAAGTCATTTGAGACAAGATATTCCTTTGCACTAAAAGATCAACAAAGGGTTGTCGAAAGTAGACCACAGTGGAGTGGAGGAATACTCGACCTTTGGGATGATATTTCTCAAGCATACCTATCACTTTTCTGCACTTTTTGTGTTTTCGGCTGGAACATGGAGAGACTTGGCTTTGGAAACATGTATGTTCATATTGCCACCTTTATGCTATTCTGCATGGCTCCCTTTTGGATTTTTATCTTGGCTGCTGTTAATATTGAGGATGACACTGTTAGGCAAGCTCTAGTGGGTACTGGGATTATCCTATGTTTCTTCGGTTTACTCTATGGTGGCTTTTGGAGGATCCAAATGAGAAAGAGATTCAATTTGCCTGCTTATAACTTCTGTTTTGGTAAACCTGCAGCTTCTGATTGCATCCTGTGGCTATGCTGTTGCTGGTGCTCTCTTGCTCAAGAAGTAAGGACCGCGAATATGTACGATATTATAGAAGACAAATTTTTCAGGAAAGAAAATGATACCAGTGGTGACAAACTACTAATTTCACCTTTGCCTCACGAAGATGTTGCATCAAACAAATCTGCCTCAAGTTCTCCTTTGGGTAGCAGCTCAGCTTCTATGATCAAACCATCTAGTCCTCTAAGTTCAAAGAGATATGACAGTCCGGGTACGCCACTATCCACGGTCAAAGAAGAGAATTCGGAAAGAGGTGAAGATGGAATAATGAAGCCACCAACTCCACCATTAATACAAAGATAA 1644 0.4094 MVSVDNGDSKEEIEESNGSKVQEFVSIDISTSRKTSPINENPQGKFQGTSNSVPNRINFFKFGSASAKFKRLATAKDQISQLVPSTGSLKERLAKKLNWDSLKKMCIKWIRDPSNIALFAWILCVAVSGAILFLVMTGMLNNVLRKKSTRNAWFEVNNQILNALFTLMCLYQHPKRIYHLVLLCRWNPDDISRLRNLYCKNGTYKPHEWAHMMVVVILLNVNCFAQYALCGLNWGYKRSERPPIGVGICIAFAIGAPAFAGLYTIISPLGKDYDSDMDEEAQNQISEARKKEQLRVKSFETRYSFALKDQQRVVESRPQWSGGILDLWDDISQAYLSLFCTFCVFGWNMERLGFGNMYVHIATFMLFCMAPFWIFILAAVNIEDDTVRQALVGTGIILCFFGLLYGGFWRIQMRKRFNLPAYNFCFGKPAASDCILWLCCCWCSLAQEVRTANMYDIIEDKFFRKENDTSGDKLLISPLPHEDVASNKSASSSPLGSSSASMIKPSSPLSSKRYDSPGTPLSTVKEENSERGEDGIMKPPTPPLIQR* 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan11g0220 547 Pfam Protein of unknown function (DUF2985) 108 186 IPR021369 -
Lan11g0220 547 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 319 454 IPR006461 -
Lan11g0220 547 MobiDBLite consensus disorder prediction 1 25 - -
Lan11g0220 547 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
Lan11g0220 547 Pfam PLAC8 family 320 450 IPR006461 -
Lan11g0220 547 MobiDBLite consensus disorder prediction 484 525 - -
Lan11g0220 547 MobiDBLite consensus disorder prediction 483 547 - -
Lan11g0220 547 PANTHER PLAC8 FAMILY PROTEIN-RELATED 1 546 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan11g0220 Lan-Chr11 1405669 1408149 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan11g0220 - - gmx:100795088 861.292
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0220 11 1405669 1408149 Lan11g0220 11 1405669 1408149 ECH
Lan2g1165 2 22855112 22857689 Lan11g0220 11 1405669 1408149 LSH
Lan11g0220 11 1405669 1408149 Lan9g1356 9 20676635 20678504 LSH
Lan3g0985 3 21560799 21563675 Lan11g0220 11 1405669 1408149 PCT
Lan11g0220 11 1405669 1408149 Lan3g0985 3 21560799 21563675 PCT