Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan9g0982 ATGTCATCTGCTGGTTTAAGCACTCTTAGCCCCGTTCCAAGGGAGCCCTTGTTGTTTCCAAATGGATTTCATACTCCACTTCACTTGGATTTGGATTATGAATCCATTTTCATATACCTCTCCTTCTCGGGGTCATTGACTCCGATGCGTGTTCTACCTTGTGATACCATTGAGTCAGTAAAACTCAAAATCAAAAGGAGTGAGGGGCTTCCTTCATTAACAAACAAGCAAAAATTGGTATGCGGTGGACGAGAGCTAGCACGGAGCAATTCTCTGCTCAAGGACTATGGGGTTACAGAAGGGAATGTTTTGCATTTGGTTATCAGGCCTACGGATCTTCAGACCATCAATGTGAGAACTTCTTGCGGGAAGGAGTTTTCGTTTCAGGTGGAAAGATGTAGGGATGTTGGGTATGTCAAGCAACAAATTGCGGAAAAGGAAAAGCGGTTTGCTGATTTTGAACAGCAGGAAGTTGTGTGTAATGGGGAACTTCTTGAGGACCAGTGGCTTATTGATGATATCTGCAGCAAACATAATGATGTAGTGATACATCTTTTTGTTAGAGAGAAATATGCAGAAGTTAAGACAGGAATGGATGAGTTGTCTATTGTGGCTACAGGGTTGAATGATAGGAAAAATAATGATGTTGATGGAGACAATTATCGGAGAAAATATGATGCCAGTAAAGAAGATACAAGGGAATATGAACCGGTAGAGCAAATTGTGCCAAGAAAATCTCTTCATAGGAATATTCTCTTGGAGCCAGTTATTGTTAACCCCAAAGTTGAATTAGCTCCAGAGATTTGGAATATGATAAACTCTTCATATGATGGACTGGATAGTGGAAAATATCCCATCAGATCTGCAGAGGGTACGGGAGGAGCTTACTTTATGCTTGATTCCACGGGGCAAAAGTGTGTATCCATTTTTAAGCCTATTGATGAAGAGCCAATGGCTGTGAATAACCCTAGAGGTTTGCCTTTGTCATTAGATGGTGAAGGCTTGAAAAAGGGTACAAGAGTTGGCCAAGGAGCATTCAGGGAGGTTGCAGCATATATTTTGGACCACCCAATCAGTGGATGTCGTTCATTATTTGGTGATGAGAAAGGCTTTGCTGGGGTTCCCCCAACTGCTATGGTTAAGTGCTTGCATAAAGGATTTGACCATCCAGATAACTTCACTGCTAAGATCGGTTCCTTGCAATTGTTCATGGAGAACAGTGGAAGTTGTGAGGATATGGGCCCTGGGGCTTTCCCAGTGAACGAAGTTCATAAAATTACCGTGTTGGACCTGAGACTGGCGAATGCCGATAGGCATGCTGGGAATATTTTGATCAGCAAAGAGGAGGAAAATGATCAGGCTGTTCTGATTCCAATTGACCATGGCTACTGCTTGCCCACGAGTTTTGAAGATTGCACCTTTGAATGGCTTTATTGGCCTCAAGCTCGCCAACCATACTCCCCAGAGACTATTGACTATATAAAATCACTGGATGCTGAAGAAGATATTGCACTTTTAAAGTTTCACGGATGGGATCTGCCAGTTGAATGCGCCCGCACTCTGCAAATCTCAACCATGCTTCTGAAGAAAGGAGTGGATAGAGGGATGACCCCCTTTGCCATTGGAAGCCTGATGTGCAGAGAATCCTTGAACAAAGACTCAGTGATTGAGGGCATTGTCCAAGAAGCACTGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTCGATGCCGTTTCCTACATCATGGAACAGCGCCTTGATGAGATTGTCAATTCCACCTCTTAA 1791 0.4333 MSSAGLSTLSPVPREPLLFPNGFHTPLHLDLDYESIFIYLSFSGSLTPMRVLPCDTIESVKLKIKRSEGLPSLTNKQKLVCGGRELARSNSLLKDYGVTEGNVLHLVIRPTDLQTINVRTSCGKEFSFQVERCRDVGYVKQQIAEKEKRFADFEQQEVVCNGELLEDQWLIDDICSKHNDVVIHLFVREKYAEVKTGMDELSIVATGLNDRKNNDVDGDNYRRKYDASKEDTREYEPVEQIVPRKSLHRNILLEPVIVNPKVELAPEIWNMINSSYDGLDSGKYPIRSAEGTGGAYFMLDSTGQKCVSIFKPIDEEPMAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPISGCRSLFGDEKGFAGVPPTAMVKCLHKGFDHPDNFTAKIGSLQLFMENSGSCEDMGPGAFPVNEVHKITVLDLRLANADRHAGNILISKEEENDQAVLIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSPETIDYIKSLDAEEDIALLKFHGWDLPVECARTLQISTMLLKKGVDRGMTPFAIGSLMCRESLNKDSVIEGIVQEALDSVLPGTSEATFLDAVSYIMEQRLDEIVNSTS* 597
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan9g0982 596 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 594 IPR044571 -
Lan9g0982 596 CDD Ubl_ubiquitin_like 116 186 - -
Lan9g0982 596 Pfam Phosphatidylinositol 3- and 4-kinase 291 540 IPR000403 -
Lan9g0982 596 ProSiteProfiles Ubiquitin domain profile. 114 173 IPR000626 GO:0005515
Lan9g0982 596 SUPERFAMILY Ubiquitin-like 34 110 IPR029071 -
Lan9g0982 596 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 282 575 IPR000403 -
Lan9g0982 596 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 594 - -
Lan9g0982 596 Pfam Ubiquitin family 116 189 IPR000626 GO:0005515
Lan9g0982 596 Pfam Ubiquitin family 38 110 IPR000626 GO:0005515
Lan9g0982 596 SUPERFAMILY Protein kinase-like (PK-like) 430 591 IPR011009 -
Lan9g0982 596 ProSiteProfiles Ubiquitin domain profile. 34 109 IPR000626 GO:0005515
Lan9g0982 596 SUPERFAMILY Ubiquitin-like 111 189 IPR029071 -
Lan9g0982 596 SMART ubq_7 114 188 IPR000626 GO:0005515
Lan9g0982 596 SMART ubq_7 36 109 IPR000626 GO:0005515
Lan9g0982 596 Gene3D - 116 191 - -
Lan9g0982 596 Gene3D - 35 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan9g0982 Lan-Chr9 16617794 16620623 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan9g0982 1 590 Acyl Lipid Metabolism Gene Families AT5G24240 53.344 0.0 607
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan9g0982 - - gmx:100815111 1007.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan11g0647 11 5401581 5404866 Lan9g0982 9 16617794 16620623 LSH
Lan9g0982 9 16617794 16620623 Lan2g0741 2 15735203 15738422 LSH
Lan4g0794 4 9973912 9976930 Lan9g0982 9 16617794 16620623 PCT
Lan2g0371 2 3635326 3638842 Lan9g0982 9 16617794 16620623 PCT
Lan16g1244 16 20459605 20463028 Lan9g0982 9 16617794 16620623 PCT
Lan9g0982 9 16617794 16620623 Lan4g0794 4 9973912 9976930 PCT
Lan9g0982 9 16617794 16620623 Lan2g0371 2 3635326 3638842 PCT
Lan9g0982 9 16617794 16620623 Lan16g1244 16 20459605 20463028 PCT