Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan2g0371 ATGTCATCTGCTGGTGTCAAAACTCTTAGTCCTGTTCCAATTGAACCATTCCATAATACACCATCATGGCCACCATGCTTGTCTATGGAAGACAAATTCATTTCCATATATCTCTCATGTTCTGGGTCGTTGACTCCGATTCGTGTTATGGAATGTGACACAATCGAGTCTGTGAAGTTCAAAATCCAAAGGTGTGAGAGCCTTCCTTTCTTAACAAACAAGCATAAGCTTGTTTATGCTGGCCGGGAACTAGCGCGGAGTGGTTCACTGCTCAAGGATTATGGTGTTACAGATGGGAATGTTTTGCATTTGATAATCAAACTTTCAGATCTTCAGGTCATCAATGTGAAAACTTCTTGTGGGAAAGAATTCATATTTCAGGTCGAACGAGGTAGGGATGTCAGGTACATAAAGAAACGGATTGCGAAATGGGGGAAATATTTTGATGATACTGAAGAGCAGGAAGTTGTGTGTAAAGGTGAAAGGCTTGAGGATCAAAGGCTTATTGATGACATCTGCAGCAAACATAATGATGCAGTGGTGCATCTTTTTGTTAGAAGAAGGCATGTAAAAGTTCAGAGAAGACCGCTCGAGTTGTCCATTGTAGCAACAGCTTCGAGTTATGAGGAAAAAAATGATGTTGGCAAAGAAGGTACTATAAGGAAGTATGACGCCATTCAACGAGTTGTGCCGAGGAAGCGTACTGATAGGGATTTTATCTTGGAGCCGGTTATTGTTAACCCTAAAGTTGAATTAGCGTCAGCGATTTGGGATATGATAAACTCTACATATGATGGACTGGATAGAGGAAAGTATCCAATCCGATCAGCAGAGGGTACAGGGGGAGCTTACTTCATGCTCGACTTGACCGGACAGAAGTATGTGTCTGTTTTTAAGCCCATTGATGAAGAGCCATTGGCTGTGAACAACCCTCGAGGTCTACCTTTGTCATTAGATGGCGAAGGCTTAAAGAAGGGTACAAGAGTTGGTCAAGGAGCATTTAGAGAAGTTGCAGCATACATTTTGGACCATCCGATGAGTGGCCGCCGCTCATTATTTGGTGACGGGAAGGGCTTCGCTGGTGTTCCACCGACATTTATGGTTAAGTGCTTGCATAAAGGATTTTACCATCCAGGAGATTTGACTGCTAAGATTGGGTCAATGCAAATGTTTGTGGAGAATAACGGAAGCTGTGAAGATATGGGCCCTGGGGCTTTTCCGGTTAAGGAAGTGCATAAAATTTCTGTATTGGACATACGTCTTGCAAATGCAGATAGGCATGCTGGGAATATTTTACTCGGCACAGAGGAGGACAATGACCATACTATTCTGATTCCAATTGATCATGGATACTGCTTGCCCACAAGTTTTGAAGATTGTACCTTTGAATGGCTGTATTGGCCACAAGCTCGCCAGCCATACTCCGCAGAAACCGTTGAGTACATAAACTCATTGGATGCTGAAGAAGATATCGCGCTTCTGAAGTTTCATGGATGGGATCTGCCAACTGAATGTGCCCGCACCCTTCAAATCTCAACCATGCTGTTGAAGAAAGGTGTAGCGAGAAAGTTGACCCCTTTCACCATCGGAAGCATCATGTGCAGGGAATCCTTGAGTAAGGAATCTATGATTGAGGAAATAGTACAAGCAGCAATGGATTCTGTTCTTCCTGGCACAAGTGAAGCTACATTTCTGGATTCTGTTTCGGAAATCATGGACCGGCGCCTAGATGAGATTGTAAGCAGCTCCCCTTTATAA 1758 0.4346 MSSAGVKTLSPVPIEPFHNTPSWPPCLSMEDKFISIYLSCSGSLTPIRVMECDTIESVKFKIQRCESLPFLTNKHKLVYAGRELARSGSLLKDYGVTDGNVLHLIIKLSDLQVINVKTSCGKEFIFQVERGRDVRYIKKRIAKWGKYFDDTEEQEVVCKGERLEDQRLIDDICSKHNDAVVHLFVRRRHVKVQRRPLELSIVATASSYEEKNDVGKEGTIRKYDAIQRVVPRKRTDRDFILEPVIVNPKVELASAIWDMINSTYDGLDRGKYPIRSAEGTGGAYFMLDLTGQKYVSVFKPIDEEPLAVNNPRGLPLSLDGEGLKKGTRVGQGAFREVAAYILDHPMSGRRSLFGDGKGFAGVPPTFMVKCLHKGFYHPGDLTAKIGSMQMFVENNGSCEDMGPGAFPVKEVHKISVLDIRLANADRHAGNILLGTEEDNDHTILIPIDHGYCLPTSFEDCTFEWLYWPQARQPYSAETVEYINSLDAEEDIALLKFHGWDLPTECARTLQISTMLLKKGVARKLTPFTIGSIMCRESLSKESMIEEIVQAAMDSVLPGTSEATFLDSVSEIMDRRLDEIVSSSPL* 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan2g0371 585 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 270 563 IPR000403 -
Lan2g0371 585 ProSiteProfiles Ubiquitin domain profile. 34 107 IPR000626 GO:0005515
Lan2g0371 585 SUPERFAMILY Protein kinase-like (PK-like) 414 579 IPR011009 -
Lan2g0371 585 SMART ubq_7 34 107 IPR000626 GO:0005515
Lan2g0371 585 SMART ubq_7 112 186 IPR000626 GO:0005515
Lan2g0371 585 Pfam Ubiquitin family 114 188 IPR000626 GO:0005515
Lan2g0371 585 Pfam Ubiquitin family 40 108 IPR000626 GO:0005515
Lan2g0371 585 Gene3D - 28 111 - -
Lan2g0371 585 PANTHER PHOSPHATIDYLINOSITOL 3-AND 4-KINASE FAMILY PROTEIN 1 582 - -
Lan2g0371 585 Gene3D - 112 189 - -
Lan2g0371 585 CDD Ubl_ubiquitin_like 114 184 - -
Lan2g0371 585 ProSiteProfiles Ubiquitin domain profile. 114 171 IPR000626 GO:0005515
Lan2g0371 585 SUPERFAMILY Ubiquitin-like 105 188 IPR029071 -
Lan2g0371 585 SUPERFAMILY Ubiquitin-like 26 108 IPR029071 -
Lan2g0371 585 Pfam Phosphatidylinositol 3- and 4-kinase 279 529 IPR000403 -
Lan2g0371 585 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 1 582 IPR044571 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan2g0371 Lan-Chr2 3635326 3638842 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan2g0371 31 578 Acyl Lipid Metabolism Gene Families AT5G24240 54.693 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan2g0371 - - gmx:100791631 956.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan4g0794 4 9973912 9976930 Lan2g0371 2 3635326 3638842 LSH
Lan2g0371 2 3635326 3638842 Lan16g1244 16 20459605 20463028 LSH
Lan2g0371 2 3635326 3638842 Lan11g0647 11 5401581 5404866 PCT
Lan2g0371 2 3635326 3638842 Lan9g0982 9 16617794 16620623 PCT
Lan2g0371 2 3635326 3638842 Lan2g0741 2 15735203 15738422 PCT
Lan11g0647 11 5401581 5404866 Lan2g0371 2 3635326 3638842 PCT
Lan9g0982 9 16617794 16620623 Lan2g0371 2 3635326 3638842 PCT
Lan2g0741 2 15735203 15738422 Lan2g0371 2 3635326 3638842 PCT