Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan8g1528 ATGAAGTTATTTCACAAACCCTCTAAAGTCCAGTCTCTGATTAACTTCATTCTAGTAATCTCTTCATTCTGTGGCCTTTATGTCCTTGCATCAATGCTACTCTTGGGCACATCAAAGCTAGTACATGTGCATTCTTCTTCATCACAAGATGTGTCTATACCAACAACAACAACAACAACAACCCTTGATCATCTTGTGTTTGGAATTGCTTCAAGTAAGAGTTCATGGCCTAAAAGAAAGGAGTATGTTAAGATTTGGTGGAAACCCAATAATGCAATGAAAGGGTGTGTGTTTGTAGATAGTATCCCAGATGAAAAAGGCCATGTTGAAAATGATACTTCTTCTCTTCCTCCATTATGTGTCTCTCAAAACACTTCACACTTTCGCTACACTTGCAAAGGGGGTCTAAGATCAGCGATCCGCGTAGCGCGTGTTGTTGCTGAGACCATAGCATTGAATCATTCAGATGTTAAATGGTACGTGTTTGGAGATGATGACACTGTTTTCTTCCCAGACAATGTGGTGAAAACACTGTCCAAATATGATCATGAGCTTTGGTACTATATTGGTGCACACTCTGAGGTGTATGAGCAGAACCGGTTGTTTGGTTTTGGAATGGCCTTTGGTGGTGCAGGTTTTGCTATCAGTTCCTCTCTTGCAAAAGTCCTGGTCAAGGTTTTTGATTCTTGTATCGAAAGGTATCCACATCTCTATGGAAGTGATGGCAGAGTGTACTCTTGCTTAGCTGAGCTTGGTGTAGGATTAACACATGAACCAGGTTTTCACCAGGTTGATTTGAAGGGAAATGCTTTTGGTCTATTGGCTGCACATCCAGTAACTCCCTTGTTGTCCCTGCATCACCCAGATTACACTGATCCAATCTTTCCGAACATGACAACTACGCAAGCTTTGAAGCATTTATTTAAAGTTGTGAATGTTGATTCCCAGAGAGTCCTACAACAAACAATTTGCTATGATAGATGGTTTTCATGGACAATTTCAGTGTCATGGGGCTACGCTGTTCAGGTTTTCCCGAACCGTATGTTTTTGCCAGATGTTCTGAGCGTGCAAGAAACATTCAAGCAGTGGAGGAAAGGGAACATGTTGGCAAAGTCATATACTTTCAACACGAAAGAACCTCACCGGGACCCTTGTAGAAGATCCACCATTTTCTATCTAGACAATGTGTCTTCTGGTAAGGATGGCATCATAACCAGCTATAAGAGATCTTTTCAAAATTGCTCAAATGATGTAGCATCGCCGAGAAAATTGGAAGGGATCAGAGTGGTCTCAGATAAGCTAGACCTTGACATTAAACAGTTGCAGGCTCCAAGAAGGCACTGTTGTGATGTATTGCCCTCTAGTGCACATGACCAACTAGAAATTGCTATCAGAGAATGCAAAGATGAAGAATTGATTCACATGCACTGA 1431 0.4144 MKLFHKPSKVQSLINFILVISSFCGLYVLASMLLLGTSKLVHVHSSSSQDVSIPTTTTTTTLDHLVFGIASSKSSWPKRKEYVKIWWKPNNAMKGCVFVDSIPDEKGHVENDTSSLPPLCVSQNTSHFRYTCKGGLRSAIRVARVVAETIALNHSDVKWYVFGDDDTVFFPDNVVKTLSKYDHELWYYIGAHSEVYEQNRLFGFGMAFGGAGFAISSSLAKVLVKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNAFGLLAAHPVTPLLSLHHPDYTDPIFPNMTTTQALKHLFKVVNVDSQRVLQQTICYDRWFSWTISVSWGYAVQVFPNRMFLPDVLSVQETFKQWRKGNMLAKSYTFNTKEPHRDPCRRSTIFYLDNVSSGKDGIITSYKRSFQNCSNDVASPRKLEGIRVVSDKLDLDIKQLQAPRRHCCDVLPSSAHDQLEIAIRECKDEELIHMH* 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan8g1528 476 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 474 - -
Lan8g1528 476 PANTHER FRINGE-RELATED 9 474 - -
Lan8g1528 476 Pfam Protein of unknown function, DUF604 198 449 IPR006740 -
Lan8g1528 476 Gene3D - 53 310 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan8g1528 Lan-Chr8 22362746 22365233 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan8g1528 10 441 Glycosyltransferase AT1G05280 53.986 1.10e-167 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan8g1528 - - gmx:100784602 775.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan8g1528 8 22362746 22365233 Lan8g1528 8 22362746 22365233 ECH
Lan6g1902 6 30047359 30049831 Lan8g1528 8 22362746 22365233 PCT
Lan10g0044 10 254276 256001 Lan8g1528 8 22362746 22365233 PCT
Lan3g0025 3 224201 226119 Lan8g1528 8 22362746 22365233 PCT
Lan8g1528 8 22362746 22365233 Lan6g1903 6 30050580 30052518 PCT
Lan8g1528 8 22362746 22365233 Lan10g0045 10 257308 259377 PCT