Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan10g0044 ATGTTGTTACTTCATACAACCACCAAAACCCATTCTTTACAAAATTTCATTTTAGTTATTTCTTCATTTTGTGGCACTTATATCCTTGCATCTGTGTTACTACTAGGCACATCAAAGGTATTAGAGGTTCATTCTTCATTACAACATAATGTGTTTGAGCCACTCACTCTTGATCATCTTGTGTTTGGAATTGCTTCAACAAATGCTTCATGGCCCACCAGGAAGCAATATACTAAACTGTGGTGGAAACCCAACAAATTGAGAGGATGTGTATTTGTGGATACTCTCCCACAAGAAAAATACCATGCTAGTAATGATTCATCTCTTCCTCCTCTATGTATATCGGAAGACACTTCTCGATTTCGATACACTTACCGCGGTGGTCTAAGATCTGCAATTCGTGTGGCACGTGTTGTGAAAGAGACTGTAGCATTGAATCATTCTAATGTAAGATGGTACGTGTTTGGAGACGATGACACAATTTTCTTTCCAGAGAATATTGTGAAAATTCTGTCCAAATATGATGATGGGCTTTGGTACTATGTTGGTTCAAACTCTGAGAGCTATAAGCAATCATGGTTCTTTGGTTTTGGAATGGCTTTTGGTGGAGGTGGTTTTGCTATAAGTTCCTCACTAGCAAAAGTCTTATCCAAAGTTTTTGACTCATGCATTCAAAGGTATCCACATCTCTATGGAAGTGATGCTAGAGTGTACTCTTGCATAACAGAACTTGGTGTCGCATTAACATATGAACCCGGCTTTCATCAGGTTGATCTGCGAGGAAATATCTTTGGCCTATTGGCTGCACATCCTATAACTCCCTTATTGTCATTGCATCACCCAGAGGACACAGATCCAATTTTCCCAAACATGACAAACACAAAAGCTATGCAACATTTATTTGAAGCAGCAAATGTTGATTCCCAGAGAATGCTACAACAAACAGTTTGCTATGACAAGCGAAATTCGTGGACGATTTCGGTGTCGTGGGGCTATGCTGTTCAAGTATTCCGAAGCAATTGGCGTTTACCAGATGTTATTGGTGTGCAACAAACATTCAGTCAATGGATGAAAGGAGATGCTTTATCAGGTGCATTTACTTTAAGCACAAGAGAACTTCACCGTGACCCATGTAAAAGACCCATCATTTTTTATCTAGACAATGTGTTTTCTGCTAAAGATGGCATTACTAAAACCAGTTATACAAAATCTCTTCAAAATTGCTCTAATGACATTGCATCACAAAACAAAGTGGAAGTCATTAAAGTCTTCACTCATAAGCTAGACCTTAACATCAAACAGTTGCAGAGTCCAAGAAGGCATTGCTGTGATGTATTGCCCTCTAGTGCTTATTACGGAATGGAAATTGCAATTAGAGAATGCAAAGATGAAGAATTGATTTTTATGCACTAA 1413 0.385 MLLLHTTTKTHSLQNFILVISSFCGTYILASVLLLGTSKVLEVHSSLQHNVFEPLTLDHLVFGIASTNASWPTRKQYTKLWWKPNKLRGCVFVDTLPQEKYHASNDSSLPPLCISEDTSRFRYTYRGGLRSAIRVARVVKETVALNHSNVRWYVFGDDDTIFFPENIVKILSKYDDGLWYYVGSNSESYKQSWFFGFGMAFGGGGFAISSSLAKVLSKVFDSCIQRYPHLYGSDARVYSCITELGVALTYEPGFHQVDLRGNIFGLLAAHPITPLLSLHHPEDTDPIFPNMTNTKAMQHLFEAANVDSQRMLQQTVCYDKRNSWTISVSWGYAVQVFRSNWRLPDVIGVQQTFSQWMKGDALSGAFTLSTRELHRDPCKRPIIFYLDNVFSAKDGITKTSYTKSLQNCSNDIASQNKVEVIKVFTHKLDLNIKQLQSPRRHCCDVLPSSAYYGMEIAIRECKDEELIFMH* 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan10g0044 470 Pfam Protein of unknown function, DUF604 191 443 IPR006740 -
Lan10g0044 470 Gene3D - 49 323 - -
Lan10g0044 470 Coils Coil 466 470 - -
Lan10g0044 470 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 9 468 - -
Lan10g0044 470 PANTHER FRINGE-RELATED 9 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan10g0044 Lan-Chr10 254276 256001 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan10g0044 59 470 Glycosyltransferase AT4G15240 52.785 1.04e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan10g0044 - - gmx:100779943 642.884
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1902 6 30047359 30049831 Lan10g0044 10 254276 256001 LSH
Lan10g0044 10 254276 256001 Lan3g0025 3 224201 226119 LSH
Lan10g0044 10 254276 256001 Lan8g1528 8 22362746 22365233 PCT
Lan7g0437 7 3138794 3144390 Lan10g0044 10 254276 256001 PCT