Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lan3g0025 ATGAAGTCCTCACCCTCTTGTTACATTCCCACCTTTCTGATAAAATCCATTTTGATATTTTCTTCAATTTGTGGCATTTGTATCTTTATAATAATGTTATTCTTGTCAACAACAAAGTTACTAGATACAAAATATTCAGTACAAGATGTGAGTGCACCAACAAGTATTGAACATCTAGTGTTTGGACTTGGTTCAGGTAGAACTTTATGGCCTAAGAGAAAACAACATGTTAAGCTCTATTGGAAACCAAATCAAATGAGAGGATGTGTATTCCTTGGATCTCTCCCACATCAACAAGACAATGATACTTCACTTCCTCCTCTATGTCTCTCTTCAAACACTTCTCAATTTCGTTACACTTGGGGACCCACTGGTCAATTATCAGCAAATCGTATGACACGTATGGTCAAAGACATAGTACACATGAATTATTCTAACGTTAGATGGTATGTTTTTGGTGATGATGACACTGTTTTCTTCCCTGACAATTTGGTTAAAACATTGTCAAAATATGATCATAGACTTTGGTATTATCTTGGTGCACCTTCTGAGAGTTATTTGGCAGCCAATGCTTTTAGCTTTAAGATGGCTTTTGGTGGAGGTGGCATTGTTATCAGTTCTTCTCTAGCACAAGCGTTAGCCAAGGTTGTTGATTCATGCTTACAAAGGTATCATAATCTCTATGGTAGTGATGCTAGGACTTATTCTTGCATAACTGAGCTTGGTGTGGAATTAACACAAGAACCCGGTTTTCATCAGGTTGATATGCTGGGTAATATCTTTGGCCTATTGGCTACACATCCAATAAGTCCCTTGTTGTCGCTACATCACGTGAATCAGACATATCCCATATTCCCAAACATGACAAATATAAAAGCTTTACAACATTTATTTAAAGCTGTAAATGTTGATTCTCAAAGGATCCTTCAACAAACAGTTTGCTATCACAACAACTTTTCATGGACCATTTCAGTGTCATGGGGTTATGCTGTTCAACTTTTCCCATCCAATATGCCTTTGCCAGATATTCTCCGTACTCCACATACATTCCAGCCCTGGAGAACAGAAGGAAATATTATGGAAAATGCATATAATTTCAACACAGTAGCACTTCAGAATGACACATGTCAAAGGCCCATTATTTTCTATATGGACACTGTTTCTTCTGGTAAAGATGGCACCATCATAACCACTTATTATAGGAAATCCTTTCAAAACTGCTCATTCCACATTGCACCACTAAACAAGCTTCAACTCATCAAAGTGTTTTCAAAGAAACTAGACCTTGACATCAATCAGATACGGAGTCCAAGAAGGCAGTGTTGTGATATATTACCCTCCAAGAAGGCAGTGTTGGAAGTTGCAATTAGAGAATGCAAAGATGGAGAACTGATTTTCATGCCTTAA 1407 0.3746 MKSSPSCYIPTFLIKSILIFSSICGICIFIIMLFLSTTKLLDTKYSVQDVSAPTSIEHLVFGLGSGRTLWPKRKQHVKLYWKPNQMRGCVFLGSLPHQQDNDTSLPPLCLSSNTSQFRYTWGPTGQLSANRMTRMVKDIVHMNYSNVRWYVFGDDDTVFFPDNLVKTLSKYDHRLWYYLGAPSESYLAANAFSFKMAFGGGGIVISSSLAQALAKVVDSCLQRYHNLYGSDARTYSCITELGVELTQEPGFHQVDMLGNIFGLLATHPISPLLSLHHVNQTYPIFPNMTNIKALQHLFKAVNVDSQRILQQTVCYHNNFSWTISVSWGYAVQLFPSNMPLPDILRTPHTFQPWRTEGNIMENAYNFNTVALQNDTCQRPIIFYMDTVSSGKDGTIITTYYRKSFQNCSFHIAPLNKLQLIKVFSKKLDLDINQIRSPRRQCCDILPSKKAVLEVAIRECKDGELIFMP* 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lan3g0025 468 PANTHER TRANSFERRING GLYCOSYL GROUP TRANSFERASE 11 466 - -
Lan3g0025 468 Gene3D - 47 324 - -
Lan3g0025 468 PANTHER FRINGE-RELATED 11 466 - -
Lan3g0025 468 Pfam Protein of unknown function, DUF604 191 442 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lan3g0025 Lan-Chr3 224201 226119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lan3g0025 9 434 Glycosyltransferase AT1G05280 45.701 1.56e-137 402
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lan3g0025 - - gmx:100779943 555.058
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lan6g1902 6 30047359 30049831 Lan3g0025 3 224201 226119 LSH
Lan10g0044 10 254276 256001 Lan3g0025 3 224201 226119 LSH
Lan3g0025 3 224201 226119 Lan8g1528 8 22362746 22365233 PCT
Lan7g0437 7 3138794 3144390 Lan3g0025 3 224201 226119 PCT